Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03021 ATGGCTCTGTCAACAACCTTAACTCTCTCCCAAGTGTCTCTGTCTCTTGTTTTGTTTTTCTTCACATCACTTCCTCCTTCCTATGCAACTTCTAGCTTCGTCCATGCCAACTCACAACAATCACGAGCAGAAAAGCTGATTAGAAGCTTCAACCTGTCCCCAAAGGACCCAGTAAACATTGTCAAAGGTGACAATGGAGGTTTTGTTTCAGGAAAGATCGTGGAGAAGGAGTTCTCGTTTTTTGGTGATTCTGGACCTTCTATTGAAGACCTTGGTCACCATGCAGGTTACTATTCACTTCCCAATTCCAAATCCGCAAGGATGTTCTACTTTTTCTTTGAATCAAGGAACAAGAAGGATGATCCAGTTGTCATATGGCTAACTGGAGGACCAGGGTGTGGCAGTGAAATTGCTCTGTTCTACGAGAATGGCCCTTTTCATATTTTCAATAATTTGTCTCTTGCATGGAATGATTATGGTTGGGATCAGGGATCAAATATTTTATTTGTTGACCAACCTACGGGAACAGGTTTTAGTTACTCTTTTGATGACACTGACATTCGCCATGATGAAGCTGGTATTAGCAATGATTTATATGACTTCTTGCAGGAGTTTTTCAAGGCACATCCTGAGTTCATTAAGAATGATTTTTATATCACTGGAGAATCATATGCTGGACACTATATTCCTGCTCTTGCATCCAGGGTTAATCAAGGAAACAAAGAAAATCAAGGAATTCATATAAACCTTAAGGGTTTTGCAATTGGTAATGGGTTAACAAATCCTGTCATTCAGTTCCCAGCATACCCACAGTTTGCATTAGATAATGGAATAATCACAAAAGCTGAATATGATGATATAAGCAAGTCTATCCCAAAATGTGAACAAGCTGCTAAAACTTGTGAGACTCAAGGTGGACAAAGCTGTGAGTATGCATTGAATATTTGTGAAAACATATTCAACAGTATATTGTCCATTGCTGGGGACATTAATTACTATGACATCAGAAAGAAGTGTGTGGGGTCATTGTGCTATGATTTCAGCAACATGGAGACGTTGTTAAACCTGCAGAACGTGAAGAGTGCTTTAGGTGTGAGCGATGACTTGAAGTTTGTTTCATGCAGTACAACAGTGTACGAAGCTATGGTTCAAGATTGGATGAAAAATCTGGAAGTGGGGATTCCTGCTCTACTTGAGGATGGAATCAAGTTGCTTGTGTATGCAGGGGAAGAAGATCTCATATGCAACTGGCTTGGAAATTCAAGGTGGGTTTACGCCATGGAATGGTCAGGCAAAAACGCGTTTGAAACATCTCAAACAATGAAATTTGTTGTTGATGGAGTAGATGCAGGGTCTTTGAACAGCTATGGACCTCTCTCTTTTCTCAAGGTATATGAAGCTGGCCATATGGTTCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGAAAAGCTGGATGGAAGGGAAACTGAGCACATAA 1482 0.4035 MALSTTLTLSQVSLSLVLFFFTSLPPSYATSSFVHANSQQSRAEKLIRSFNLSPKDPVNIVKGDNGGFVSGKIVEKEFSFFGDSGPSIEDLGHHAGYYSLPNSKSARMFYFFFESRNKKDDPVVIWLTGGPGCGSEIALFYENGPFHIFNNLSLAWNDYGWDQGSNILFVDQPTGTGFSYSFDDTDIRHDEAGISNDLYDFLQEFFKAHPEFIKNDFYITGESYAGHYIPALASRVNQGNKENQGIHINLKGFAIGNGLTNPVIQFPAYPQFALDNGIITKAEYDDISKSIPKCEQAAKTCETQGGQSCEYALNICENIFNSILSIAGDINYYDIRKKCVGSLCYDFSNMETLLNLQNVKSALGVSDDLKFVSCSTTVYEAMVQDWMKNLEVGIPALLEDGIKLLVYAGEEDLICNWLGNSRWVYAMEWSGKNAFETSQTMKFVVDGVDAGSLNSYGPLSFLKVYEAGHMVPMDQPKAALQMLKSWMEGKLST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03021 493 SUPERFAMILY alpha/beta-Hydrolases 92 490 IPR029058 -
Spst9g03021 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 87 476 IPR001563 GO:0004185|GO:0006508
Spst9g03021 493 Gene3D alpha/beta hydrolase 78 492 IPR029058 -
Spst9g03021 493 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Spst9g03021 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Spst9g03021 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Spst9g03021 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Spst9g03021 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Spst9g03021 493 Pfam Serine carboxypeptidase 91 489 IPR001563 GO:0004185|GO:0006508
Spst9g03021 493 FunFam Carboxypeptidase 81 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03021 Spst-Chr9 64240374 64243626 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g03021 9 64240374 64243626 Spst9g03021 9 64240374 64243626 ECH