Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03009 ATGTCTTCCACCAGCACTTTTCTGCACTCTTGCTTCCTCATCTTCTGCCTCCTCTCAGCTCCTTCCTGTGTTTCCATGTTCTCTGGTATTGAGACAGGAGATTTAGAAAAAAGAGATGATTTGTTTCCACAGATTCTAAGAGACGAGGCAGTGGCGAGGCTTTACGAGCTTGGGAAGGTGAGTGATGCTAGTGGTTATTTGGAGAGGACATTCTTGAGTCCAGCATCAATGAGGGCAATTAATCATATTCGTAAATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTCGAGTTGATGGTGTAAATGCAAATGCCGGAGCTTTATTGATTGGTTCTCACATGGACACTGTTGTTGATGCTGGGATGTTTGATGGATCCCTAGGAATAGTCTCTGCAATATCTGCCTTGAAGGCCATGCATGTCAATGGAAAGCTGGAAAAGCTAAAGCGGCCCGTCGAGGTGATTGCATTTAGTGATGAAGAGGGTGTCAGATTTCAAACTACTTTCTTGGGCAGTGGTGCTATAGCTGGTATTTTGCCTGCTACAACATTGGAGATATCTGATAAGAGGGATGTAATGATAAAAGATTTTCTTAAGGAGAACTCAGTAGACATTACAGAGGAAAGTCTTTTAAAGCTTAAGTATGACCCAAAATCTGTTTGGGGTTATGTTGAGGTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGGCAAACACGATTGAAGGTTACAGTAAGAGGATCACAAGGTCATGCTGGAACAGTCCCAATGTCCATGCGCCAGGATCCTATGGCAGCTGCTGCGGAGCAGATCGTAGTCTTGGAAAACCTCTGTAAACATCCTGAAGAATACCTTTCTTATGATGGTCATTGCAGTGATTCAACAGTGAAATCACTGTCAAGCTCACTTGTCTGTACTGTTGGAGAGATCTCAACATGGCCAAGTGCCAGTAATGTCATTCCAGGCCAGGTTACATACACGGTGGACATACGAGCAATTGATGACCTTGGACGTGAAGCTGTTATCTATGATTTATCGAAACAAATTTATCAAATATGTGACAAGCGTTCAGTTTCCTGCATTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATTCTGATCTGAGTTCACAGCTCAAATCTTCAGCTTATTCTGCACTCAAGAAGATGGAGGGTGACATTCAGGATGAAGTGCCAACATTAATGAGTGGAGCAGGGCATGATGCAATGGCAATATCTCACTTAACAAAGGTGGGAATGCTGTTTGTGCGATGTCGTGGAGGCATTAGTCACTCTCCACAAGAGCATGTGCTGGACAATGATGTCTGGGCAGCTGGTTTAGCAACCTTGTCATTTCTGGAAAATCTATCATAA 1440 0.4375 MSSTSTFLHSCFLIFCLLSAPSCVSMFSGIETGDLEKRDDLFPQILRDEAVARLYELGKVSDASGYLERTFLSPASMRAINHIRKWMEDAGLRTWVDQMGNVHGRVDGVNANAGALLIGSHMDTVVDAGMFDGSLGIVSAISALKAMHVNGKLEKLKRPVEVIAFSDEEGVRFQTTFLGSGAIAGILPATTLEISDKRDVMIKDFLKENSVDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLENLCKHPEEYLSYDGHCSDSTVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCIIEHKHDAGAVICDSDLSSQLKSSAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENLS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03009 479 PANTHER ALLANTOATE DEIMINASE-RELATED 15 477 IPR010158 GO:0016813
Spst9g03009 479 Gene3D Zn peptidases 61 468 - -
Spst9g03009 479 Gene3D - 257 389 - -
Spst9g03009 479 Pfam Peptidase dimerisation domain 257 368 IPR011650 -
Spst9g03009 479 NCBIfam hydantoinase/carbamoylase family amidase 51 471 IPR010158 GO:0016813
Spst9g03009 479 SUPERFAMILY Bacterial exopeptidase dimerisation domain 257 389 IPR036264 -
Spst9g03009 479 FunFam Allantoate deiminase 257 389 - -
Spst9g03009 479 CDD M20_bAS 51 476 - -
Spst9g03009 479 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 116 125 IPR001261 -
Spst9g03009 479 SUPERFAMILY Zn-dependent exopeptidases 42 478 - -
Spst9g03009 479 Pfam Peptidase family M20/M25/M40 117 467 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03009 Spst-Chr9 64185871 64189923 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g03009 9 64185871 64189923 Spst9g03009 9 64185871 64189923 ECH