Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03005 ATGAGACTCTTAATCTTTGTCTTTCTCTTATTATTGGTACCAGCACAAGAAGCTACATGCTTCAACAAACATGCACCACCACCTTTGTCACATTTCAGCAACAAGTTTAAGGATAGAATGACCATTGTCAAGTCATCTCAACCACCCTCTGCATCTCCATCTACCAAAATGAGTGGGAGAGTGGTGTACCCAGTTGAGTATGGTGCAGACCCCAGTGGTGCACATGATAGCAGTGATGCAATTCTGAAAGCTGTTGGAGATGGTTTTGCAATTGAGAGTGAAGTTGAGTTGGTGGGAAGAGTTAGAGACCTTGGAGGGGTTGTGATTGATCTGCAAGGTGGAAACTACACAATCACCAAACCCATCCAATTTCCTTCTTCTGGGGGTGGCAATGTTGTGGTAAAGGGGGGAACATTGCGAGCTTCTGATTCATTCCCCACTGATAGGCATCTTGTTGAGTTATGGGCGTCAAATTCACAGAAGCTTCCAAAAACATCAGTTTTCAACAGCATGAAACTTCGACAAAGTGATGGTGTTTATTATGAAGACATAACATTTAGAGACATTCTCTTTGATTCTGGCTTCAGGGGTGGAGGGATATTCATTGTTGATTCTGTGAGAACAAGGATCAACAACTGCTTTTTCCTGCACTTTGCCACAGAAGGGATTCTAGTTCAAGGTGGCCATGAGACATTCATATCAAGCACTTTCCTTGGGCAGCACTCAACAGTTGGTGGAGACAAAGGGGAGAGGAATTTCTCTGGCACTGCCATTGATCTTGCCAGCAATGACAATGCAATCACAGATGTTTCAATTTTCTCTGCAGCCATAGGAATTGTCCTTAGGGGCCAGGCCAACATGCTCACAGGGGTGCATTGCTATAACAAGGCCACAGGTTTTGGTGGCATTGGCATTTTGGTGAAACTAGCAGGGAATTCACAGACTAGAATTGATAATTGTTACATGGACTATACAGCAATAGTGATGGAAGATCCAGTTCAAGTCCATGTCACTAATGGGTTTTTCTTAGGGGATGCTAACATAGTTTTGAAGTCAATTAAAGGACAAATTTCTGGTTTGAATATAGTTGACAATATGTTCACTGGGGACCCCAATAAAAAGGTTCCAATTGTAAGTCTAGATGGGCAATTCAGTAACATTGATCAAGTGGTGACTGATAGGAACAATGTGGCTGGCATGAGCTTGAGGTCAACAGTTGGGAAGTTAATTGTGGAAGGAAATGGCACAAAATGGGTGGCAGATTTTTCCAACATTTTGCTATTCCCCAATAGGATTAGGCACTTCCAGTACTCCTTTTACGCGCAAGGGGTGACCAAGTTTTTGGCACATTCTGTGACCAATGTGACTAAAAATGTTGTAGTTGTGGAAAGTGAGAAACCAGCTCAAGGGGTTGTTTCCTTCTTGGTTGAACAGTGA 1437 0.4287 MRLLIFVFLLLLVPAQEATCFNKHAPPPLSHFSNKFKDRMTIVKSSQPPSASPSTKMSGRVVYPVEYGADPSGAHDSSDAILKAVGDGFAIESEVELVGRVRDLGGVVIDLQGGNYTITKPIQFPSSGGGNVVVKGGTLRASDSFPTDRHLVELWASNSQKLPKTSVFNSMKLRQSDGVYYEDITFRDILFDSGFRGGGIFIVDSVRTRINNCFFLHFATEGILVQGGHETFISSTFLGQHSTVGGDKGERNFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMLTGVHCYNKATGFGGIGILVKLAGNSQTRIDNCYMDYTAIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLNIVDNMFTGDPNKKVPIVSLDGQFSNIDQVVTDRNNVAGMSLRSTVGKLIVEGNGTKWVADFSNILLFPNRIRHFQYSFYAQGVTKFLAHSVTNVTKNVVVVESEKPAQGVVSFLVEQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03005 478 Gene3D - 65 470 IPR012334 -
Spst9g03005 478 FunFam Polygalacturonase QRT3 64 473 - -
Spst9g03005 478 PANTHER POLYGALACTURONASE QRT3 14 478 IPR039279 GO:0004650
Spst9g03005 478 SUPERFAMILY Pectin lyase-like 1 390 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03005 Spst-Chr9 64141008 64143525 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g03005 9 64141008 64143525 Spst9g03005 9 64141008 64143525 ECH