Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02996 ATGGCGCCGGGAGTCGGAGGCCTGCAGCTTACTTCCCTCGCTGGCGAACGAAGAGCAGCCGCCGCTGAAGACTCCGATGACCTCGAGGACGTGCGGCTCTTGGACTCCTACGACCAAATCGACTCTGGAGAGAGGCGGATTCAGGTGACGGTCACCGGCATGACCTGCGCCGCTTGCTCCAATTCCGTCGAATCAGCTCTCAAATCACTCGACGGCGTTATCAGTGCCTCCGTCGCACTGCTTCAGAACAAAGCCGACGTCGTTTTCAACTCGGCTCTGCTCAAGGATGAAGACATTAAACATGCAATTGAAGATGCTGGGTTTGAAGCGGACATATTACCTGAATCCATTACAGTTGGAAAGATGCCACATGGAACCTTGGTGGGACAGTTCACAATTGGAGGTATGACATGTGCAGCATGTGTAAATTCTGTTGAAGGTATTTTGAGAAATCTTCCAGGGGTCAAGAGGGCTGTGGTAGCTTTGGCTACTTCGTCAGGTGAAGTCGAATATGATCCCAGTGTAATTAATAAAGATGATATAGTCAACGCAATTGAAGATTCTGGTTTTGATGCTTCATTTTTACAAAGCAGCGAACAAGATAAAATAATTTTAGGGGTGGATGGTGTATACGGTCTGATTGATGGGCAAATTTTAGAAGGCATTCTTAGCAGCACAAAAGGAGTCCGGCAGTTTCATTTTGACCAGATTTCAGGTGTGTTGGATGTTCTGTTTGATCCTGAAGTTCTCAGTTCTAGATCCTTAGTTGATGCAATCCAGGGGGGGAGTAATGGGAAGTTTAAATTACATGTTAGAAGCCCTTATTCAAGAATGGCTTCTAAAGGTGTTGAAGAGACCTCAACTATATTTCGGCTCTTTATCTCCAGTCTTTTTCTTAGTATTCCTCTCTTCTTCATGAGGGTGGTTTGTCCTCATATTCCACTGGTGTATTCCTTGTTACTTCGGCGATGTGGGCCTTTCCTCATGGGTGATTGGTTGAAATGGGCATTGGTGAGTCTCATCCAATTTGTGATTGGTAAGCGCTTCTACATTGCAGCTGGCAGAGCTCTTAGAAATGGTTCTACAAACATGGACGTCCTGGTTGCAGTGGGAACTACTGCTTCTTACGTTTATTCTGTTTGTGCTCTCCTATATGGTGCTCTTACTGGATTTTGGTCTCCAACTTACTTTGAAACAAGTGCTATGCTCATAACATTTGTGTTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCTATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTACTAGTTGTCAAAGATAAAGGTGGTAAAACTATTGAAGAAAGGGAAATTGATTGTTTGCTTGTTCAACCTGGGGACACATTGAAAGTTCTTCCTGGTGCAAAGATTCCTGCTGATGGTATTGTAACTTGGGGCTCAAGTTATGTAAATGAGAGCATGGTAACCGGTGAATCTGTACATATTTTGAAGGAGGTGAATGCTTCTGTTATTGGAGGTACAATAAATTTGCATGGTGTCCTTCATGTTCAGGCTACCAAAGTAGGATCTGATACAGTTTTGAGCCAGATTATTAGTTTGGTTGAGACAGCACAGATGTCCAAAGCTCCTATTCAGAAATTTGCTGATTATGTAAGTATATTGGTCATGGTTGTGTTTGCCTATGTTGCCCTCAGGGTGACCTGTGGCAAGCATATTTGTTCCTTTGGTTGTTTCTTTGGCATTATTGACGTTTCTGTGCTGGTAAGGTACATTGCTGGGTCTATTGAAGCTTACCCAGAAGAGTGGCTGCCAGAAAATGGAAATCGCTTTGTTTTTGCTCTAATGTTCTCAATATCTGTAGTAGTAATTGCATGTCCTTGTGCACTGGGCTTGGCAACACCAACAGCTGTGATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTCTTAATTAAAGGAGGAGACGCATTGGAAAGGGTTCAGAGGGTGAAGTATGTGATATTTGATAAAACAGGAACTCTAACTCAGGGAAAAGCCACTGTTACTACTGCCAAGACATTCACAGGAATGGAACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTAGCAAAAGCCATATTAGCATATGCACGCCATTTTCATTTCTTTGATGACTCTTCTGCTGCTACTGGTACCGAGAATGATGCTGAGAATGACGTTAAATCTGGTTGGCTTTTTGATGTCTCAGACTTCTCTGCTCTTCCTGGAAGAGGTGTTCAATGTTTTTTAGATGGGAAGCATATTTTGGTTGGTAACAGGAAGTTGATGGTGGAAAATGGTATACATATTTCAACAGAGGTGGAAAATTTTGTGGTAGAGCTTGAAGAGAGTGCAAAGACAGGGATACTGGTAGCATATAATGATATATTAACTGGAGTCTTGGGGATTGCAGACCCACTAAAGAGAGAAGCTCCTGTAGTCATAGAGGGTCTTCAGAAAATGGGTGTCACACCTGTTATGGTCACAGGAGATAACTGGAGAACAGCTCGAGCTGTTGCCAAGGAGGTTGGCATCCAAGATGTTAGGGCAGAGGTTATGCCAGCAGGAAAAGCTGATGTCATACGTTCATTCCAAAAAGATGGAAACATAGTTGCAATGGTGGGTGATGGCATCAATGATTCTCCTGCATTAGCTGCAGCTGATGTTGGTATGGCTATTGGAGCTGGAACTGATATTGCTATAGAAGCTGCTGACTATGTGCTGATGAGAAATAACTTGGAAGATGTGATCACGGCCATTGATCTTTCTCGGAAGACCTTCTCTCGAATTCGATTGAACTATGTGTTTGCAATGGCTTACAATGTTGTGGCCATACCAGTTGCCGCTGGTGTTTTCTACCCTTCACTGGGGATCAAGCTACCCCCGTGGGTTGCTGGTTCTAGAAAAGATTCATCATCAAACTTGGTATTCAAAACCGAGCCAGTCCTAACATTAAATGTGACTAAGACTCAACATGTGCTTTCATTGGTTGATTTTAATCGGTTTGACAAAGACTTTGTCTCTAGTAAAAACACGTGGGCTCTGGGTGTTGAGTGCTACTGTCACAACTAG 3120 0.4369 MAPGVGGLQLTSLAGERRAAAAEDSDDLEDVRLLDSYDQIDSGERRIQVTVTGMTCAACSNSVESALKSLDGVISASVALLQNKADVVFNSALLKDEDIKHAIEDAGFEADILPESITVGKMPHGTLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSSGEVEYDPSVINKDDIVNAIEDSGFDASFLQSSEQDKIILGVDGVYGLIDGQILEGILSSTKGVRQFHFDQISGVLDVLFDPEVLSSRSLVDAIQGGSNGKFKLHVRSPYSRMASKGVEETSTIFRLFISSLFLSIPLFFMRVVCPHIPLVYSLLLRRCGPFLMGDWLKWALVSLIQFVIGKRFYIAAGRALRNGSTNMDVLVAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKTIEEREIDCLLVQPGDTLKVLPGAKIPADGIVTWGSSYVNESMVTGESVHILKEVNASVIGGTINLHGVLHVQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVSILVMVVFAYVALRVTCGKHICSFGCFFGIIDVSVLVRYIAGSIEAYPEEWLPENGNRFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERVQRVKYVIFDKTGTLTQGKATVTTAKTFTGMERGEFLKLVASAEASSEHPLAKAILAYARHFHFFDDSSAATGTENDAENDVKSGWLFDVSDFSALPGRGVQCFLDGKHILVGNRKLMVENGIHISTEVENFVVELEESAKTGILVAYNDILTGVLGIADPLKREAPVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVIRSFQKDGNIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAIPVAAGVFYPSLGIKLPPWVAGSRKDSSSNLVFKTEPVLTLNVTKTQHVLSLVDFNRFDKDFVSSKNTWALGVECYCHN 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02996 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 387 964 IPR023298 -
Spst9g02996 1039 NCBIfam heavy metal translocating P-type ATPase 364 988 IPR027256 GO:0006812|GO:0016020|GO:0019829
Spst9g02996 1039 SUPERFAMILY HMA, heavy metal-associated domain 42 113 IPR036163 GO:0046872
Spst9g02996 1039 CDD P-type_ATPase_Cu-like 291 982 - -
Spst9g02996 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 671 677 IPR018303 -
Spst9g02996 1039 ProSiteProfiles Heavy-metal-associated domain profile. 127 193 IPR006121 GO:0046872
Spst9g02996 1039 SUPERFAMILY HAD-like 668 968 IPR036412 -
Spst9g02996 1039 Gene3D - 771 821 IPR023299 GO:0000166
Spst9g02996 1039 Gene3D - 676 770 IPR023299 GO:0000166
Spst9g02996 1039 Gene3D - 636 947 IPR023214 -
Spst9g02996 1039 PRINTS Copper-transporting ATPase 1 signature 101 121 - -
Spst9g02996 1039 PRINTS Copper-transporting ATPase 1 signature 46 71 - -
Spst9g02996 1039 PRINTS Copper-transporting ATPase 1 signature 72 95 - -
Spst9g02996 1039 SUPERFAMILY HMA, heavy metal-associated domain 125 198 IPR036163 GO:0046872
Spst9g02996 1039 FunFam Copper-exporting P-type ATPase A 126 195 - -
Spst9g02996 1039 ProSitePatterns Heavy-metal-associated domain. 133 162 IPR017969 GO:0046872
Spst9g02996 1039 Pfam haloacid dehalogenase-like hydrolase 665 904 - -
Spst9g02996 1039 SUPERFAMILY Calcium ATPase, transduction domain A 451 536 IPR008250 -
Spst9g02996 1039 ProSitePatterns Heavy-metal-associated domain. 51 81 IPR017969 GO:0046872
Spst9g02996 1039 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 32 992 - -
Spst9g02996 1039 Gene3D - 129 194 - -
Spst9g02996 1039 FunFam Copper-exporting P-type ATPase 770 821 - -
Spst9g02996 1039 Pfam Heavy-metal-associated domain 131 191 IPR006121 GO:0046872
Spst9g02996 1039 Pfam Heavy-metal-associated domain 49 109 IPR006121 GO:0046872
Spst9g02996 1039 SFLD Haloacid Dehalogenase 651 942 - -
Spst9g02996 1039 CDD HMA 130 193 IPR006121 GO:0046872
Spst9g02996 1039 Pfam E1-E2 ATPase 433 648 - -
Spst9g02996 1039 CDD HMA 48 110 IPR006121 GO:0046872
Spst9g02996 1039 ProSiteProfiles Heavy-metal-associated domain profile. 45 111 IPR006121 GO:0046872
Spst9g02996 1039 NCBIfam copper ion binding protein 47 110 IPR006122 GO:0005507
Spst9g02996 1039 NCBIfam copper ion binding protein 130 192 IPR006122 GO:0005507
Spst9g02996 1039 FunFam Copper-transporting ATPase RAN1 676 769 - -
Spst9g02996 1039 Gene3D - 418 540 - -
Spst9g02996 1039 FunFam Copper-exporting P-type ATPase A 43 113 - -
Spst9g02996 1039 FunFam Probable copper-transporting ATPase HMA5 779 947 - -
Spst9g02996 1039 FunFam Copper-transporting ATPase 1, putative 418 540 - -
Spst9g02996 1039 Gene3D - 45 115 - -
Spst9g02996 1039 NCBIfam HAD-IC family P-type ATPase 764 972 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02996 1039 NCBIfam HAD-IC family P-type ATPase 403 592 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02996 1039 SFLD p-type atpase 651 942 IPR044492 -
Spst9g02996 1039 PRINTS P-type cation-transporting ATPase superfamily signature 815 826 - -
Spst9g02996 1039 PRINTS P-type cation-transporting ATPase superfamily signature 890 909 - -
Spst9g02996 1039 PRINTS P-type cation-transporting ATPase superfamily signature 486 500 - -
Spst9g02996 1039 PRINTS P-type cation-transporting ATPase superfamily signature 669 683 - -
Spst9g02996 1039 PRINTS P-type cation-transporting ATPase superfamily signature 913 925 - -
Spst9g02996 1039 PRINTS P-type cation-transporting ATPase superfamily signature 837 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02996 Spst-Chr9 64094823 64107412 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02996 9 64094823 64107412 Spst9g02996 9 64094823 64107412 ECH