Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02976 ATGGCAGCAACCGTTCCTTTCTCTCTGCTAAGGAACTGCGCGCCATTGAAACTAGCAACACCCTTCGCTCGCAAAGCCTCCAACTTTAATCTCCTTTTCCCTCTTCAACCACGCAGGTTGGGCTTTTGTACTCATGCCACAAATAATGAAGAGGCTGCAGCAAAAGCAGCTGCTGTTAATTTTGATAGTGAAGCTCCAACAATATTTGATAAAATCATCAACAAGGAAATCCCTTCTAGTATTGTTTACGAGGATGAAAAGGTTCTGGCATTTAGAGATATTAATCCACAGGCTCCAGTTCATGTTCTAGTCATTCCAAAATTTAGAGATGGATTAACACAACTTGGGAAGGCTGATAGCAGACATGGGGAAATATTGGGTCAACTTCTCTATGCTGCCAAAATAGTAGCTGAGAAAGAAGGTATCGTCGATGGATTTCGAGTCGTCATCAACAATGGTCCAAGTGCATGTCAATCTGTGTATCATCTGCACTTGCATGTATTAGGTGGGAGACAGATGAATTGGCCACCAGGTTGA 537 0.4283 MAATVPFSLLRNCAPLKLATPFARKASNFNLLFPLQPRRLGFCTHATNNEEAAAKAAAVNFDSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKFRDGLTQLGKADSRHGEILGQLLYAAKIVAEKEGIVDGFRVVINNGPSACQSVYHLHLHVLGGRQMNWPPG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02976 178 Pfam HIT domain 75 172 IPR011146 GO:0003824
Spst9g02976 178 ProSiteProfiles HIT domain profile. 68 178 IPR011146 GO:0003824
Spst9g02976 178 PANTHER HISTIDINE TRIAD HIT PROTEIN 45 178 IPR001310 -
Spst9g02976 178 CDD PKCI_related 66 170 - -
Spst9g02976 178 ProSitePatterns HIT domain signature. 151 169 IPR019808 -
Spst9g02976 178 Gene3D - 46 178 IPR036265 -
Spst9g02976 178 FunFam Histidine triad nucleotide-binding protein 1 47 178 - -
Spst9g02976 178 SUPERFAMILY HIT-like 66 177 IPR036265 -
Spst9g02976 178 PRINTS Histidine triad family signature 68 84 IPR001310 -
Spst9g02976 178 PRINTS Histidine triad family signature 158 168 IPR001310 -
Spst9g02976 178 PRINTS Histidine triad family signature 89 107 IPR001310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02976 Spst-Chr9 63841068 63843724 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02976 9 63841068 63843724 Spst9g02976 9 63841068 63843724 ECH