Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00518 ATGGCATCGAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAAAGCGGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTACCTATAGAACATGGATTCATGCAATGAGGGATGCGTCCAGCCTATGGAACTGTGATGAAGTCCGCCGAGATCTACAAACTGCCCTTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAAAGAGCAGCTCAATCAAGTTATAGCAAAGTTTCAACTGAGGATGCGATAAATAGGCACCGAGATTTTGTTGATGCCATCAGTGACAAAATTAGCAAAGTTGAACTTTTGTTGCAAGAACCTGTTCATTCAGGTAGCAAGGCATCTCTGCCTTGGACGCGTATGGATGAAGGAGAACGAGATGAACTAGCGTCATTTCTTTCGGGAACATCGGCTGCTGGTGGCAGAGATGGTGAAAATCTGCAATTAAGTGACAAAGATTCGTTCCCTAATTGTTCAACCAATTTAAATGTTTCATCTGGGTGGGGGCCATCTGAAGCAGCACAGGAAAAGTCACTTGGACATCGCAGGGCAGCCAGCGCTGGTGCTGATATTGGTTCTTGGAAAATCACTGTTTCTGATGCTGTGCAACAATCAAGTTCCTCTAATGGTTCTTCTGGTCTAATTCCTATGCATAAGGTAGCTAGTCTCTCAGGATTTTTTGGTTCCATGGAAACTATCTCTAAGTTGAAGTGGCCTGTGAATGGTTATAGAAAGCTGAAACCAGTAAATCATTGCGAAGAAACGGATAATGCGCTACTACCATCAGCTGGATTGAATGGGGGCACCAATGCATGCTATGAAAACAGTAAGACTTGCCTCGATAATTGTGATGAATCTTATGATAAGCAACTTCATGGGTGGTACGGGGCTTTGCAAAGGCAGCTTCAAAGATCTCAATACCAAATACAATACAATCGGCATGTTCAAATAACTGTCTGGGCTGTTATTCTTCTTTGCTTGATTGTTTTCATTGCTTTTTGCACGATGTAG 1017 0.4297 MASSFDRWEKDPFFKAAEEVQESADRMESTYRTWIHAMRDASSLWNCDEVRRDLQTALGTAKWQLEEFERAAQSSYSKVSTEDAINRHRDFVDAISDKISKVELLLQEPVHSGSKASLPWTRMDEGERDELASFLSGTSAAGGRDGENLQLSDKDSFPNCSTNLNVSSGWGPSEAAQEKSLGHRRAASAGADIGSWKITVSDAVQQSSSSNGSSGLIPMHKVASLSGFFGSMETISKLKWPVNGYRKLKPVNHCEETDNALLPSAGLNGGTNACYENSKTCLDNCDESYDKQLHGWYGALQRQLQRSQYQIQYNRHVQITVWAVILLCLIVFIAFCTM 338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00518 338 PANTHER OS05G0443700 PROTEIN 1 330 - -
Spst9g00518 338 Gene3D - 9 108 - -
Spst9g00518 338 SUPERFAMILY t-snare proteins 10 105 IPR010989 GO:0016020|GO:0016192
Spst9g00518 338 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Spst9g00518 338 CDD SNARE_NTD_STX6-like 11 104 - -
Spst9g00518 338 FunFam Syntaxin 10 8 109 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst9g00518 Spst-Chr9 4597789 4600804 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00518 9 4597789 4600804 Spst9g00518 9 4597789 4600804 ECH
Spst8g02214 8 31987774 31990299 Spst9g00518 9 4597789 4600804 PCT