Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00507 ATGGAAACTCGTGCAGCTGCTAAGAGAAAGGCAACTGCTGCCACAGTGGTTGTGGTTGAAAAACAACACCCCAAAAGACAGCGTGTTGTGCTGGGTGAACTTTCAAATTTTCCTAGTCTTATTGTCCCCGAGTCTCAAAATCCACGCAAAGAGAAACTGCAATGTCGGAAAAATCCAAATTTAAAGAAACCATCATCCACGAAATCCACCCTTTCTTTCTCCCAGATTGACCAACCTTATGTTGCCGACATCTATGAGTACCTTCATGCAATGGAGATGCAGAGGAAGAGAAGACCAATGGTTGACTATGTTGAGAAGCTTCAGGGAGAAGTTACAGTAACCATGAGGACAATATTGGTGGATTGGTTAGTAGAGGTAGTTGAAGAGTACAAGCTTCACTCGGATACTCTTCATCTCTCTGTTTCATACATAGATAGGTTTTTATCGGTTAATCGTGTCAGTAAATCAAGACTTCAGTTATTGGGTATTTCATCCATGCTCATTGCTGCCAAATATGAGGAAGTTGAGCCACCCCGTGTTGATGCATTCTGCAATATCACTGATAACACATACGACAAGGCAGAGGTTGTAAAGATGGAAGCTGACATACTCAAGTCTCTAAAGTTTGAAATGGGAAATCCTACTGTAAACACCTTTTTAAGGAGGTTTGCTGATGTTGCTTCTGAAAACCAGAAGGCTCCAAATTTATTGGTTGAATTTCTGGGCTGCTATCTTGCTGAGCTAAGTTTGTTGGACTATGATTGCTTGAAATTTTTGCCTTCAATTATGGCAGCGTCGGCTGTATTTCTTGCCAGATTCATTATCTCGCCTGAAATGCATCCTTGGGCACTCAATGTTGAGAACCTATTGCAGACTTCGTCCTTGTGTGAATGCGCTGGTTACAAAGCAGTTGAATTGAAAGAGTGTGTCCTCATCTTGCATGACTTGTATTTGTCAAGAAAGGCGATGTCCTTCAAAGCTGTTCGGGAGAAATACAAGTTCAAGTTCGTGGCAAACATGCCTTCTCCTCCGCATATACCAAGTTATTACTTTGAAACTCAGTGA 1065 0.4178 METRAAAKRKATAATVVVVEKQHPKRQRVVLGELSNFPSLIVPESQNPRKEKLQCRKNPNLKKPSSTKSTLSFSQIDQPYVADIYEYLHAMEMQRKRRPMVDYVEKLQGEVTVTMRTILVDWLVEVVEEYKLHSDTLHLSVSYIDRFLSVNRVSKSRLQLLGISSMLIAAKYEEVEPPRVDAFCNITDNTYDKAEVVKMEADILKSLKFEMGNPTVNTFLRRFADVASENQKAPNLLVEFLGCYLAELSLLDYDCLKFLPSIMAASAVFLARFIISPEMHPWALNVENLLQTSSLCECAGYKAVELKECVLILHDLYLSRKAMSFKAVREKYKFKFVANMPSPPHIPSYYFETQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00507 354 SUPERFAMILY Cyclin-like 78 211 IPR036915 -
Spst9g00507 354 Pfam Cyclin, C-terminal domain 214 341 IPR004367 -
Spst9g00507 354 SMART cyclin_7 121 205 IPR013763 -
Spst9g00507 354 SMART cyclin_7 218 315 IPR013763 -
Spst9g00507 354 MobiDBLite consensus disorder prediction 47 69 - -
Spst9g00507 354 SMART Cyclin_C_2 214 343 IPR004367 -
Spst9g00507 354 Gene3D - 97 212 - -
Spst9g00507 354 FunFam G2/mitotic-specific cyclin 99 210 - -
Spst9g00507 354 PANTHER CYCLINS 63 333 IPR039361 -
Spst9g00507 354 Pfam Cyclin, N-terminal domain 83 211 IPR006671 -
Spst9g00507 354 FunFam Cyclin superfamily protein, putative 211 283 - -
Spst9g00507 354 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
Spst9g00507 354 SUPERFAMILY Cyclin-like 214 344 IPR036915 -
Spst9g00507 354 PIRSF Cyclin_A_B_D_E 2 348 IPR046965 GO:0016538|GO:0044772
Spst9g00507 354 Gene3D - 83 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00507 Spst-Chr9 4517716 4519403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00507 3 352 Core Cell Cycle Gene Families AT1G47210 51.220 1.33e-124 361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02210 8 31899110 31902873 Spst9g00507 9 4517716 4519403 PCT