Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00504 ATGGAGACTCGGGCTGCTGCAAAGAGAAAGGAAGCCGTCGTGGTGGTTGAAAAACAGCACCCAAAGAAGCATCGGGTTGTATTGGGGGAGCTTTCCAATCTACCAAACCTTATTGCCCCTGAAACTCAAAATCTGCGTAGAGAGAAACTGCAATGTAGGAAGAATCACAATATTAAGAAACTATCTTCCTTGAACAGCACTCTTTCTTCTTCCCAGATTGATCAACCTTATGTCTCGGATATCGATGCGTATCTTCGTGCAATGGAGATGCAGAGAAGACCAATGGTTAACTACATGAACAAAGTTCAGTCCGTAGTTACTACAAACATGAGAGAAATATTGGTGGATTGGTTAGTGGACGTTGCTGTGGAGTATAAGCTTCTACCCGAAACGCTACATCTTTCCATATCGTATATTGATAGGTTTTTATCAGTTAGCCCTGTTGCCAAATCGAGACTTCAGTTACTCGGTGTTTCATCCATGTTCATTGCTTCGAAGTATGAGGAAGTTAATCCACCCCGTGTGGAAAAATTCTGCAGCATCACTGATAACACTTATCAAAAGGAAGAGGTTGTAAAGATGGAAGCTGAAATACTTGGGTCCCTCAACTTTGAACTGAGCAATCCAACTGCGATCACTTTTCTAAAGAGGTTTTTGGGTGTTGCATCTCAGAACCAGAAAAAACAAAATTTGAAGATTGAGTTTCTGAGCTTCTACCTTGCGGAGCTAAGCTTGTTGGATTATGATTGTATAAGATACTTGCCTTCTATTTTGGCTGCATCGGCTATCTTTCTTGCCAGATTTATTATCTCCCCTGAAGTGCATCCTTGGACTTCTTCTCTGAGTGAATGGTCTGGCTACAAACCAGTTGAGTTGAAAGCTTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCGTCCTTGCAATCTGTTAGAGATAAATACAAGCAGCACAAGTTCAAGTACGTGGCAAACCTGCCTTCTCCTCCACATGTACCAAGGATATTAAATTCTATGCTTCAACTGAGTCTGAAGTTGATTACCCAATCGCTGATGTGA 1068 0.4157 METRAAAKRKEAVVVVEKQHPKKHRVVLGELSNLPNLIAPETQNLRREKLQCRKNHNIKKLSSLNSTLSSSQIDQPYVSDIDAYLRAMEMQRRPMVNYMNKVQSVVTTNMREILVDWLVDVAVEYKLLPETLHLSISYIDRFLSVSPVAKSRLQLLGVSSMFIASKYEEVNPPRVEKFCSITDNTYQKEEVVKMEAEILGSLNFELSNPTAITFLKRFLGVASQNQKKQNLKIEFLSFYLAELSLLDYDCIRYLPSILAASAIFLARFIISPEVHPWTSSLSEWSGYKPVELKACVLTLHDLYFSRKAASLQSVRDKYKQHKFKYVANLPSPPHVPRILNSMLQLSLKLITQSLM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00504 355 Gene3D - 80 328 - -
Spst9g00504 355 ProSitePatterns Cyclins signature. 111 142 IPR006671 -
Spst9g00504 355 SUPERFAMILY Cyclin-like 209 334 IPR036915 -
Spst9g00504 355 SMART cyclin_7 116 200 IPR013763 -
Spst9g00504 355 SMART cyclin_7 213 301 IPR013763 -
Spst9g00504 355 FunFam G2/mitotic-specific cyclin 94 205 - -
Spst9g00504 355 CDD CYCLIN_AtCycA-like_rpt2 209 323 - -
Spst9g00504 355 PIRSF Cyclin_A_B_D_E 1 340 IPR046965 GO:0016538|GO:0044772
Spst9g00504 355 Gene3D - 94 207 - -
Spst9g00504 355 PANTHER CYCLINS 60 320 IPR039361 -
Spst9g00504 355 SMART Cyclin_C_2 209 332 IPR004367 -
Spst9g00504 355 Pfam Cyclin, N-terminal domain 81 207 IPR006671 -
Spst9g00504 355 FunFam Cyclin superfamily protein, putative 206 278 - -
Spst9g00504 355 Pfam Cyclin, C-terminal domain 209 331 IPR004367 -
Spst9g00504 355 SUPERFAMILY Cyclin-like 73 206 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00504 Spst-Chr9 4507650 4509606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00504 3 336 Core Cell Cycle Gene Families AT5G43080 53.097 1.23e-125 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02209 8 31883194 31886755 Spst9g00504 9 4507650 4509606 PCT