Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00493 ATGGGGGTTTGGGCTATAGCGGTGCATGGTGGCGCTGGCGTCGACCCGAATCTCCCACCACAGCGTCAGGAGCAAGCCAAACAACTCCTTACTCGCTGTCTACATCTTGGCATCTCTGCCCTTCGTTCCAATGCTTCCGCCCTCGACGTCGTCGAACTTGTCGTACGGGAACTGGAAACGGATCCCCTATTTAACTCTGGTCGAGGATCCGCCCTGACAGATAAGGGAACAGTGGAAATGGAGGCAAGCATCATGGACGGTACCAAGAGGCGATGCGGCGCTGTTTCTGGTATCACCACCGTCAAAAACCCCATCTCACTCGCTCGCCTTGTCATGGACAAGTCTCCACATTCCTACCTCGCCTTTAACGGCGCTGAAGAATTCGCCAGACAACAGGGTGTGGATGTTGTGGAGAACGAATACTTCATCACTCCTGAAAATGTCGGTATGCTGAAACTAGCAAAGGAGGCAAACACAATCCTTTTTGATTATCGGATTCCAACGGTTGGACACGACAGTTGCGGCGTGGGGGTTGAGAAATCGTTGCAGATGAATGGGCTGCCGATAAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAAGGAAGGAAGGTGTGCGGCTGGGACGTCGACGGGGGGTTTGATGAACAAGATGAGTGGAAGAATCGGTGACTCACCTCTGATAGGTGCAGGGACTTACGCGTGTGGGGTATGTGGGGTTTCGTGCACAGGGGAAGGGGAAGCTATCATACGTGGCACACTGGCGCGTGAGGTGGCAGCAGTGATGGAATACAAAGGCCTCGGACTTCAAGGGGCTGTGGACTTCGTGATCAAGCACCGCCTGGATGATGGCAAGGCAGGGCTCATCGCCGTCTCAAATACCGGTGAAGTGGCTTACGGCTTCAACTGTAACGCCATGTTCAGAGGCTGCGCCACCGAGGAGGGATTCATGGAGGTCGGAATCTGGGACTAG 981 0.5525 MGVWAIAVHGGAGVDPNLPPQRQEQAKQLLTRCLHLGISALRSNASALDVVELVVRELETDPLFNSGRGSALTDKGTVEMEASIMDGTKRRCGAVSGITTVKNPISLARLVMDKSPHSYLAFNGAEEFARQQGVDVVENEYFITPENVGMLKLAKEANTILFDYRIPTVGHDSCGVGVEKSLQMNGLPISVYAPETVGCVVVDKEGRCAAGTSTGGLMNKMSGRIGDSPLIGAGTYACGVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQGAVDFVIKHRLDDGKAGLIAVSNTGEVAYGFNCNAMFRGCATEEGFMEVGIWD 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00493 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Spst9g00493 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Spst9g00493 326 CDD Asparaginase_2 5 318 - -
Spst9g00493 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Spst9g00493 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Spst9g00493 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00493 Spst-Chr9 4433880 4435621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00493 6 281 Miscellaneous Gene Families AT4G00590 27.181 5.00e-18 82.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00493 9 4433880 4435621 Spst9g00493 9 4433880 4435621 ECH
Spst8g02195 8 31693504 31695075 Spst9g00493 9 4433880 4435621 PCT