Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00452 ATGCTGAAGACGATGCCATCTAAAGCTTTAATTACCATAATCAATTTTGTTTTCCTCACTATCTTTCTGCTTGTTTATGCCACTGTTCTTCCCCGTCCATCTTCTGACTATTTGGAGAATGCAGGCTCCCTTGTGAGGTGCTCCTTGGGTGAATGTCATCAAAAGAAGACAGAAAAAAGCTTCAAAATGAAAGCAGTATTGGAGGAAACTCAAGCAAACCAACATACGGAAAAGCATAAGAGAGCAAACAAGGTGGTACCAAGCTTTTTTGGCGAGATGGGGAAGGGAATGAGGATAGGACTGGTGAACATGGAAGAAGGTTATGTGAGTGAATGGAGCAAGCATGGGGAAACCACACGAGTTTATTTCGAGAGGGTGTCACAATTTTTGAATTGGACAGACTTGTTTCCTGAATGGATAGACGAGGAAGAAGAGAATGATGTGCCATCATGTCCGGAGATACCTATGCCAGAGTATGCAGAATATGGAAGCATGGACATCATCGTTGCCAAGCTGCCATGCAGGTATCCCAAAAAAGGGTGGAGAAGGGACGTTTTCCGGTTACAAGTTCATCTTATAGTTGCGAATTTAGCCACAAAGAATGCCAAGAATGATTGGAGAGGGAAGACAAAAGTGGTTTTCTGGAGCAGGTGTAGACCAATGATGGAGCTGTTTCCATGCGACAACTTGGTTAAGCGGGAAGGTGAATGGTGGTTCTATGAAGCTGAGGTGAAGAGGTTAGAACACAAGGTTTCATTGCCCGTTGGGTCCTGCAAGTTGGCCTTGCCTCTATGGGAACAAGGAACGAAGGAGGGGCACGAGTTGTCGAAGAATGAGCAAAAAATTGAAAGCAGAGTGAGAATGAAGCGCGAAGCTTACGCGACGGTGCTGCATTCCTCAGAAGCATACGTTTGCGGCGCCATAACGCTCGCACAAACCCTCCTCCAAACAGGAACCAAACGCGACCTAATTCTCCTCGCGGACAATTCCATCTCTGTATCCAAACGCGATGCCTTATCGAAAGCGGGTTGGATGGTCCGAATTATGACCCGGATACGAAACCCGAGGGCTGAGAAAGGAAGCTACAACGAATACAACTACAGCAAGTTCCGTCTGTGGCAGCTCACCGACTACGACAAAATAATCTTCATCGATTCCGACATTATCGTACTCCGCAACCTCGACATCCTCTTCCGCTTCCCGCAGATATCCGCCACGGGGAACGACCAATCAATATTCAACTCCGGGATAATGGTGATCGAGCCTTCGAACTGCACGTTCCGTGTGCTGATGCGGCTCCGCGACGACATCGTTTCGTACAACGGAGGGGACCAGGGGTTTCTGAACGAGGTTTTCGTGTGGTGGCACAGGCTGCCGCGGAGGGTGAACCTTCTAAAGAATTTCTGGGCGAAGACGACGGCGGAGGCGAGGGAGAAGAACGCGCTGTTCGGGGCGGAACCGGCGGAGGTGTACGCGATTCACTACCTGGGGTGGAAACCGTGGCACTGCTACAGGGACTACGACTGCAACTGGGACACCTTGGAGCAGAGGGTGTACGCGAGTGACGTGGCCCACAGGAGGTGGTGGAAAGTTCACGACGGCATGGAGGAGAGGTTGCAGAGATTCTGTGGGTTAACGAAACGGCGTCGGAGTGAGTTGAAGTGGGAGAGGAGAAAGGCCAGGAAGATGCGTTTAGCCGATGGACATTGGAAAATCAATATCAGCGATCCTAGGCGATTTCTCGCTCTCTCCATCGATTAG 1761 0.4974 MLKTMPSKALITIINFVFLTIFLLVYATVLPRPSSDYLENAGSLVRCSLGECHQKKTEKSFKMKAVLEETQANQHTEKHKRANKVVPSFFGEMGKGMRIGLVNMEEGYVSEWSKHGETTRVYFERVSQFLNWTDLFPEWIDEEEENDVPSCPEIPMPEYAEYGSMDIIVAKLPCRYPKKGWRRDVFRLQVHLIVANLATKNAKNDWRGKTKVVFWSRCRPMMELFPCDNLVKREGEWWFYEAEVKRLEHKVSLPVGSCKLALPLWEQGTKEGHELSKNEQKIESRVRMKREAYATVLHSSEAYVCGAITLAQTLLQTGTKRDLILLADNSISVSKRDALSKAGWMVRIMTRIRNPRAEKGSYNEYNYSKFRLWQLTDYDKIIFIDSDIIVLRNLDILFRFPQISATGNDQSIFNSGIMVIEPSNCTFRVLMRLRDDIVSYNGGDQGFLNEVFVWWHRLPRRVNLLKNFWAKTTAEAREKNALFGAEPAEVYAIHYLGWKPWHCYRDYDCNWDTLEQRVYASDVAHRRWWKVHDGMEERLQRFCGLTKRRRSELKWERRKARKMRLADGHWKINISDPRRFLALSID 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00452 586 PANTHER GLYCOGENIN SUBFAMILY MEMBER 181 579 - -
Spst9g00452 586 Pfam Glycosyl transferase family 8 296 502 IPR002495 GO:0016757
Spst9g00452 586 SUPERFAMILY Nucleotide-diphospho-sugar transferases 288 540 IPR029044 -
Spst9g00452 586 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 288 538 IPR029044 -
Spst9g00452 586 CDD GT8_Glycogenin 291 535 - -
Spst9g00452 586 FunFam Hexosyltransferase 288 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00452 Spst-Chr9 3982474 3985870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00452 63 579 Glycosyltransferase AT4G33330 63.931 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00452 9 3982474 3985870 Spst9g00452 9 3982474 3985870 ECH
Spst8g02154 8 30757999 30762312 Spst9g00452 9 3982474 3985870 PCT