Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00435 ATGCCAGTTGAACAGGTTGATCATTTTCTAAAGCTAGCTCTTGTTACAGTACCTTCACAATCAGCTATGCAACTTCCGTGTTATGGGAAGTATAGGAATCCTGATGAGAGAGAGATACACATGTACCCCATCACTACCACAAACTATAAAACTTTTAATTTGCCTTGTGGTGAATATATGCATGCAGTTGCAGACTTCATAGAAGAATTGGAAAAGATGAACACCAAAGTCAAGCCCAGGCTGCAGCATAAGAAACCTCCAATGACAGTGTCACATGAAAGGGCAGAGATGCGGGAAAGCTTGCGAGGGGGAGCGAATAGAGCAGTTAAGGGTGGTAAAACATCGAGCAAAGACAGAAAAATGGCTTTACAGCAAGATGTTGACAGGTTGAAGAAAAAGCTTAGGCGTGAGGAGAACATCCACAGAGCATTGGAGAGAGCTTTCAACAGGCCTTTGGGAGCTTTGCCTCGTCTTCCTCCATATCTCCCTCCCTATACACTAGGACTTCTGGCTGAGGTGGCTGTACTGGAAGAAGAAATTGTTAGGCTTGAGGAACAGGTTGTGCATTTCAGGCAGGACTTGTACCAGGAAGCTGTGTACATGTCATCCTCGAAGATGAAACTTGAGCAATCAGCTGGTGTGAACAATGCAAGCCCAAATAGTAGTTCCGATCTGGTTAAAATGAAGTCCTTTTCCCAGACAATGGATAATACTGCAAGATCTGAAACTAGGCCTACAACAACACTTCCAAAAGATAGACATGGAAAAGAGAACCAATCATGCACTAATTCTTCCAAGAGTTGCAAGCAATCCATATGCAAAGGCCAAACTACAAAATCGCCGATTAAGAAACTTCCCATTGACAATAAATCACTGAAGAAACGTTGGGATCCTCCAAAAAAGCAGCAAGAACCAAGAGTGAAAGACCAGCCAATTGCAGAAGTAAGAAACCATAGTCTACAAGAAAAAATACAAGGGAGGGAAAGTCCAAATATAATCTCTGAAAATATTCTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTACTGCAAAGAATTTGGATTCCGCAGGTGATGTACCACACTCATGGACTCCAAAATCGAATGAAAACTGCGTTGAAGGAAGTGAGTTTTGGGATCCTTATGGTATCTGTTCGGAATTGGGAAAGAGGGATATTGGTCCATACAAGCAATTACGTGCAATTGAAGCCAATTCGTTCGATCCAAAACGAACCGCAAAGTCTTTGTTTTTACTGCATCGTTTGAAACTTCTTCTGAGAAAACTAGCCTGTGTCAAGGTTGAGAATCTCAACCACCAGGAGAAGCTTGCATTCTGGATCAATATCTATAACTCATGTGTGATGAATGCATACATAGAAAATGGCATACCAGAGAGTCCTGAAATGGTTGTTGCGCTGATGCAGAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGTGCAACAACCATAGAACATTGCATTTTAAGACTTCCTTATAACAGGAAATTTACAACATTATCAAAGGGAGGGAAAAATCATGAAACTTACGGATTCGAATTGTCACAACCTCTAGTGACATTTGCTCTATCCTGTGGAACTTGGTCCTCTCCAGCGGTGAGAGTTTACACAGCATCTCAGGTTGAGCACGAACTTGAAATGGCGAAAAGGGAATACTTACAGGCTGCAGTTGGAATTTCGACATCAAAGTTCCTTATACCCAAGTTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATGTGCCTCCAATTACCAAGTGATGTGGGGAAAGAAGCCATTAAGTTTCTTGAGGAAAAAAAAACCGAGCCCCTCTCACAATTTGTACACATTTTGCCACATGAGTTCAATTTTAGATACTTGCTGTGCACATAG 1917 0.4168 MPVEQVDHFLKLALVTVPSQSAMQLPCYGKYRNPDEREIHMYPITTTNYKTFNLPCGEYMHAVADFIEELEKMNTKVKPRLQHKKPPMTVSHERAEMRESLRGGANRAVKGGKTSSKDRKMALQQDVDRLKKKLRREENIHRALERAFNRPLGALPRLPPYLPPYTLGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSKMKLEQSAGVNNASPNSSSDLVKMKSFSQTMDNTARSETRPTTTLPKDRHGKENQSCTNSSKSCKQSICKGQTTKSPIKKLPIDNKSLKKRWDPPKKQQEPRVKDQPIAEVRNHSLQEKIQGRESPNIISENILKCLSSILLRMSTAKNLDSAGDVPHSWTPKSNENCVEGSEFWDPYGICSELGKRDIGPYKQLRAIEANSFDPKRTAKSLFLLHRLKLLLRKLACVKVENLNHQEKLAFWINIYNSCVMNAYIENGIPESPEMVVALMQKATINVGGHLLSATTIEHCILRLPYNRKFTTLSKGGKNHETYGFELSQPLVTFALSCGTWSSPAVRVYTASQVEHELEMAKREYLQAAVGISTSKFLIPKLLDWYLLDFAKDLESLLDWMCLQLPSDVGKEAIKFLEEKKTEPLSQFVHILPHEFNFRYLLCT 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00435 638 PANTHER EXPRESSED PROTEIN 106 637 - -
Spst9g00435 638 MobiDBLite consensus disorder prediction 286 311 - -
Spst9g00435 638 Coils Coil 113 147 - -
Spst9g00435 638 Coils Coil 166 193 - -
Spst9g00435 638 MobiDBLite consensus disorder prediction 260 284 - -
Spst9g00435 638 MobiDBLite consensus disorder prediction 233 311 - -
Spst9g00435 638 Pfam Protein of unknown function, DUF547 435 560 IPR006869 -
Spst9g00435 638 Pfam Leucine-zipper of ternary complex factor MIP1 116 197 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00435 Spst-Chr9 3865884 3874331 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00435 9 3865884 3874331 Spst9g00435 9 3865884 3874331 ECH
Spst8g02119 8 29933895 29936818 Spst9g00435 9 3865884 3874331 PCT