Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00403 ATGACTCGTCTGGAGGCACTGGTTGATCGAATGGATGTGTACTTAAGTCTAAGATTCTGCTTCGTGCTGCAGATTATATTGATATTGGCGTGGGTAGAGGCCCACAATGCAGGTCTCCACGAACACCAACTTCAGGGAGGCTTGGAGAGGAATACTGAGAGCATTGCCTCACACTCTTGCATACATGACCAAATTCTTGAACAAAGGAAGCGTCCTGGTCGCAAGGTGTATTCAGTTACCCCACAGTTTTATGAGCCTGGTCGCTTGAAACACCTTCAGCATAAAGGTAGGGCATTACTTCATGTGTCAACGCAATCAAGTTCTCAAGAGGATGCAAAGAGGCCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCTTCTGACAGGGATTGTCGAGCACTTGGTGACATTGTCAAACTTGGGGAGCCTCCCATGACTTCTCCTCCTGGTTTTCCCTCTTGCGATCCCCATGGTAATCCTCCAATATTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGGGAGGACAAAAAACATCGCCTTCGTAAGGCCTTAGGTCAGACGGCTGACTGGTTTAGGAGAGCATTGGCAGTTGAACCTGTCAAGGGGAACTTGCGGTTAAGTGGGTATTCTGCATGTGGACAAGATGGGGGTGTGCAGCTTCCGCGTGGATATATTGAGGAGGGTGTCTCTGATGCCGACCTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGCGAGCGAGATCAGTGGGGGCGTGCTATAGCTGGACATGTTAATGTTGCGCCCCGCCATTTGACTGCTGAGGCAGAGACTTTACTTTCAGCTACTCTTATACACGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTTCTCATTTTAGAGATGAAAGGAAAAGACGGCGTGATCAGGTTACGGAACAAGTTATGGATGAAAAGCTTGGACGGATGGTAACACGAGTGGTGCTTCCTCGTGTTGTCATGCATTCTCGATATCATTATGCGGCGTTCTCAGGAAATTTTTCTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCTCTTCTAGAAGATAGTGGATGGTACAAGGCCAATTATAGTATGGCAGACCGTCTTGAGTGGGGTCGCAACCAAGGTACTGAGTTTGTTACCTCCCCGTGCAATCTTTGGAAGGGAGCCTATCGTTGCAACACGACACAGTTTTCTGGCTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTATAGTGGAGACCTCCCACAGTGGGCTCGGTATTTTCCGCAAGCTAATAAGGGTGGACAATCCTCATTAGCTGATTATTGTACTTATTTTGTTGCTTACTCTGATGGATCATGTACAGACACTAACAGTGCACGAGCACCTGATAGAATGCTAGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCTTCATCACTAGTACGGACAGGCTTTGTACGAGGTTCAATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATTCAGTTCCTTGGCTTTAACGGTGAATTAGTCTGCCCAGCCTACCATGAACTCTGTAACACTGACCCGATAGCTGTGTCTGGTCACTGCCCTAATTCATGTAATTCCAATGGAGATTGTGTTGATGGAAAATGCCGATGCTTTCTTGGATTTCACGGGAATGATTGCAGTAGACGTTCCTGCCCCAGCAAATGCAATGGCAATGGAATGTGCCTTTCCAATGGGATTTGTGAATGTAAACCTGGCTATACCGGCATTGATTGCTCCACTGCTGTGTGTGACGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGGGTTTGTGAATTTCGCTGTTCTGACTATGCGGGATATACATGCCAGAACAGCTCTATGCTCCTCTCTAGTCTTTCGGTGTGTAAAAATGTGCTGGGAAATGATGTTTCTGGACAGCATTGTGCGCCCAGTGAGCCTAGCATACTTCAACAGCTGGAAGAAGTAGTTGTTATACCCAACTACCATCGATTATTCCCTGGTGGTGCTAGGAAATTATTTAACATATTTGGCAGCACCTACTGTGATGAGACTGCTAAACGTCTTGCCTGCTGGATTTCAATCCAGAAGTGTGACAAAGATGGAGATAACAGGCTTCGGGTATGCCATTCTGCATGTCAGTCTTATAATCTAGCATGTGGAGCTTCGCTTGACTGCTCTGATCAGACCCTTTTCAGCAGTGACGGGGAAGGGGAGGGTCAGTGCACTGGCTCTGGTGAGATGAAATTGTCATGGTTTAATCGTCTACGAAGCACTTTTTCTTTGAGAAATAGATCCTTGAAAGGAATATCTGCTAAATTGGATGAGGTTGCAGATTTGGCTTTCAAAGAGGAGAGCCTTTTGTAG 2604 0.4627 MTRLEALVDRMDVYLSLRFCFVLQIILILAWVEAHNAGLHEHQLQGGLERNTESIASHSCIHDQILEQRKRPGRKVYSVTPQFYEPGRLKHLQHKGRALLHVSTQSSSQEDAKRPIRIYLNYDAVGHSSDRDCRALGDIVKLGEPPMTSPPGFPSCDPHGNPPIFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFSHFRDERKRRRDQVTEQVMDEKLGRMVTRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLEWGRNQGTEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPQAGGPIQFLGFNGELVCPAYHELCNTDPIAVSGHCPNSCNSNGDCVDGKCRCFLGFHGNDCSRRSCPSKCNGNGMCLSNGICECKPGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSTYCDETAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSDGEGEGQCTGSGEMKLSWFNRLRSTFSLRNRSLKGISAKLDEVADLAFKEESLL 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00403 867 FunFam Peptidase M8, leishmanolysin 109 299 - -
Spst9g00403 867 Pfam Leishmanolysin 170 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst9g00403 867 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 112 599 - -
Spst9g00403 867 FunFam SD03917p 592 634 - -
Spst9g00403 867 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Spst9g00403 867 SMART egf_5 603 631 IPR000742 -
Spst9g00403 867 SMART egf_5 634 663 IPR000742 -
Spst9g00403 867 FunFam leishmanolysin-like peptidase isoform X2 437 496 - -
Spst9g00403 867 FunFam leishmanolysin-like peptidase isoform X2 310 434 - -
Spst9g00403 867 Gene3D Laminin 634 665 - -
Spst9g00403 867 Gene3D Laminin 603 632 - -
Spst9g00403 867 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 53 816 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst9g00403 867 Gene3D Leishmanolysin domain 4 498 593 - -
Spst9g00403 867 Gene3D Leishmanolysin , domain 2 309 434 - -
Spst9g00403 867 Gene3D - 108 299 - -
Spst9g00403 867 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst9g00403 867 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst9g00403 867 Gene3D Leishmanolysin domain 3 437 496 - -
Spst9g00403 867 FunFam leishmanolysin-like isoform X2 498 593 - -
Spst9g00403 867 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Spst9g00403 867 Pfam EGF-like domain 635 662 IPR013111 -
Spst9g00403 867 ProSitePatterns EGF-like domain signature 2. 651 662 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00403 Spst-Chr9 3574628 3581052 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00403 9 3574628 3581052 Spst9g00403 9 3574628 3581052 ECH
Spst8g02310 8 34066243 34072383 Spst9g00403 9 3574628 3581052 PCT