Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00392 ATGATTCCTTTTTCTTGTCTGCTTTCGCTGCTCATTATCCCCTACACGCCATTCTCCTCCTCTTCTCCAACTCGTTTCCTCTTCCAAATTTCCCTTCCATCTCACAAACACAATCCTCCGCACTCTGCACTTTCACTTCCACAATTTCCCGCCAGGTCGTCGTCGAGCAATTCCAACTTGGAGGTTGATTTCAACGATGTGTTTGGAGGCCCGCCGCGGCGGTCATCGATAAACGAAGCGCGGCAGAGTTTGAGCGAGTTGAAGGATTGGAGCGACGAGGAAGGGGAAAGAGGTTGGTGTAGGTGGCCGCCGGAGCGGGAGAAACCGGTGTTTGGAGAGGATAGTGGAAACCGGAGGCGTCACGCGAACAAAAACAGCGACTTCTTCGATGACATATTCGGAGGGGAGGAGTCGGCGAGTGTGTGTTCCACGCCAAAGAAGCGCGTTGGGGACCCTTACACGTTCTCTCGAGTGTCCAGTCCTCTGCCTCCCGCGGCTGATCCCTTTGATGCCTCTCTCCCTATTCCATTCAGCCTTCCAGCCAAATTGACATATGGAGTGGACCTTCCAACCTTTGGTTCCCCCACAAGGAGTAACAACATCAACGATGGTATTGTAGCTTCAAATGGACTAGGCCTTTCAGATTCTCATTCATCCAGATTTTCAACCCAGCGAAAGGAGTTGAAAAAGGATTTAAAACCTTACCGACAAAGTCTTCTATCACAGGAGTTTTCAAACTCGAGCACATCTGATAAAGCAGACAAAGGAAGCATCATGAAACAGGACATATCTATTAGGGAGGTTTCACCTAGTGCTAGTAATGGTCAATTCCATTTCTCAATATACAAATGGGCAAGTACAGGTGTGCCAATGGTGATGCCTATTAGGACAGAGAGAGCCTCAAGGGCTAAGGATAAGGATAAGGTTAAACTTGAGAGAAGCTCAAGTGCTAAAGAATGGATGGTCAGTGAGATTACCACACAAAATCCTATAGCATACAATGGTTCATCTGTCATGAATAATAGACAAGATGTGTCAACTACTTTCACAACCAATGAAAATGGAGCAGATTCAAACCAGATTGTAGAACAAATAGTTTCTGCCAAGGCTCAGTCAGATACATCATGCAACCCTCAAACTGTTACCATAGATGTTCCCGCTAGTTCTATCTCGCGTAACTCTAGAGCAGTAGAATCAAGTACTCGTTCTACAGGCAAGAACGGCTTCTCTGGAGAAACTGGGGCAGTAAGGGAAACCCAGAAGCTTGAGTCCAAACCATTACAGTTTCTGTTCAAGGAAAATGATAAGAAACAAGATAATGTTCAGATGATAACAAGGGAGAAAGGAGAAAACAGGATGAAAACCACAAAAAAACTGTCTGCTGTTTTTGAAGTTACCGTGAATCCCATTAAACAAGAAGAAAAGATAGTTTCCTTGATGGATGTAGGACATAGCAAAGCGACTTCCCAGGGTTCAGTAAGCTTAGGTGAGAATATGGGGAAAGGCCTAGTTAAAGGAAAGGTCAAAGAATTCACTCGAATTTTCAACCAAGAAACTGTAACCAAACCAAAAGTTGACTCCAAATGTCGACCTCCGGGTTCTACATACAAGCAGAGAGAGGCTTTAAGGACAAAGAATGAAGTGGAAAGTGGGCCTGAACAATCCAAGAAGGAGAACTCTGGCATAGAGACCACCAACATATCTGCTAATAATTTGTCTCATCGAGAGGATATATCAGAACCAGCAATTCCTGATATATCATTTGAAGTTATCGGAGATAAAGACGAGTCCTTCCATGGGAGTTTCATGATACAAGTATTGGCCCAAGTTGAGGGTGAGGAGGACTTACAAAACCAGGAAAATAAAGAAATCCAAATGATTGACAAGAAGATAAAACAGTGGTCTAAAGGGAAGGAAGGAAACATACGATCCCTGCTATCGACATTACAATATGTACTTTGGACCGAGAGTGGATGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAACGCAGTGAAAAGATCTTATCAAAGAGCTTTACTCTGTCTGCATCCCGATAAGTTGCAGCAAAAGGGTGCTACTTTAGACCAAAAATATATTGCAGAAAAAATTTTCGAAATTTTACAGGAGGCATGGACTCAATTCAGTATGCTAGGTGCACTCTAA 2169 0.4389 MIPFSCLLSLLIIPYTPFSSSSPTRFLFQISLPSHKHNPPHSALSLPQFPARSSSSNSNLEVDFNDVFGGPPRRSSINEARQSLSELKDWSDEEGERGWCRWPPEREKPVFGEDSGNRRRHANKNSDFFDDIFGGEESASVCSTPKKRVGDPYTFSRVSSPLPPAADPFDASLPIPFSLPAKLTYGVDLPTFGSPTRSNNINDGIVASNGLGLSDSHSSRFSTQRKELKKDLKPYRQSLLSQEFSNSSTSDKADKGSIMKQDISIREVSPSASNGQFHFSIYKWASTGVPMVMPIRTERASRAKDKDKVKLERSSSAKEWMVSEITTQNPIAYNGSSVMNNRQDVSTTFTTNENGADSNQIVEQIVSAKAQSDTSCNPQTVTIDVPASSISRNSRAVESSTRSTGKNGFSGETGAVRETQKLESKPLQFLFKENDKKQDNVQMITREKGENRMKTTKKLSAVFEVTVNPIKQEEKIVSLMDVGHSKATSQGSVSLGENMGKGLVKGKVKEFTRIFNQETVTKPKVDSKCRPPGSTYKQREALRTKNEVESGPEQSKKENSGIETTNISANNLSHREDISEPAIPDISFEVIGDKDESFHGSFMIQVLAQVEGEEDLQNQENKEIQMIDKKIKQWSKGKEGNIRSLLSTLQYVLWTESGWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGATLDQKYIAEKIFEILQEAWTQFSMLGAL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00392 722 MobiDBLite consensus disorder prediction 387 412 - -
Spst9g00392 722 MobiDBLite consensus disorder prediction 522 573 - -
Spst9g00392 722 Gene3D DnaJ domain 618 721 IPR036869 -
Spst9g00392 722 SUPERFAMILY Chaperone J-domain 590 717 IPR036869 -
Spst9g00392 722 MobiDBLite consensus disorder prediction 540 556 - -
Spst9g00392 722 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 43 562 - -
Spst9g00392 722 MobiDBLite consensus disorder prediction 557 573 - -
Spst9g00392 722 FunFam J-domain protein required for chloroplast accumulation response 1 618 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00392 Spst-Chr9 3466533 3474972 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00392 9 3466533 3474972 Spst9g00392 9 3466533 3474972 ECH
Spst8g01926 8 24790959 24797093 Spst9g00392 9 3466533 3474972 PCT