Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00384 ATGGCTGACCGCATCTCCGCCACTCGCCTCCACCACATCTCTGCTGCACCTCCTTTTCAGATCTCCAAAGATTTCCATGGCACTGACAATCCTATTCCACTTTCACCACAGTGGCTTCTGCCAAAGTCTGGGGAGAGTAAACCTGCAATAGGAACTGTGGAAAACCATGTGATCTCAACTCCACGAAATGGCAATCGCTCAGAGATGGTTAAAATGTCTGGAAATGGAGAGGATGTGAATGATGGCCATAAGCGAAAGGATGTCTTTCGGCCATCCATGCTTGACTCTGAAAGTGGACGCCGTGACCGTTGGCGTGATGAAGAGAGAGATACTAAGTCCTCTTTACACAAGGATAGTTGGAGGAATGGAGACAAAGACCTAACTGACACTCGGAGAATGGATCGGTGGAGTGAAAATCCATCGACAAGGCACTTTGGAGAAACACGTCGTGGCTCATCTGATAGATGGAATGATTTAGGCAACAAAGATACAAACTTTGAACAGCGGCGTGAAAGTAAGTGGAACACACGCTGGGGACCTGATGTAAAGGAGCCAGAAGGTCTTCGTGAAAAATGGAGTGACCCTGGTAAAGAAGGGGATCTGGATGTTGGCAAGCGATTGTCTAACATTTCCAATCTTGTTAAGGATGAAAAGGAAGGGGATCATTATCGGCCATGGAGACCTAACTTCTCACAAAGTCGTGGAAGGGTAGAGCCTACCCAGCATCAAAATATGATGCCAAACAAACAAGTAGAGTCTAAACCATTGTCATACGGGTGGGCCACTGGGGAGGATACCCCACCAGTCATTGCTTTTGGGCGCGCACGGTTTGGCTCTGGCAGTAACTCCATTAATAACACATATATGGATTCTCAATACCCTGGAACTTTATTGGATAAAGTTGAAAGTGAGCATGTAGAAGCTCGTTCCTTTAGATATAGCAGGACAAATTTACTTGATGTGTACAGAGTTGCTGATATGCATAGAAATAGAAAACTAGTAGAATTTGAGCAGGTACCTTCTATTACACAGGATGAACCATTGGAGCCTCTAGGTTTTTGTGCTCCAAATTCTGAGGAACAGTCTGTATTAAATGATATTGACAAAGGGGAAATAATTAGTAGCAGTGCACCTCAGGTGCCAAAAGATGGACGGAACTCAACAGAATTTACACATTCAAGACGAACCAAGCTTGTAAATGCTCCTTTCCAAGATAGAGTTGAAGATAATGGTTCTTACAGAATGGTTGATGAGGTGCCTAGTAACAGAGAATCAACCATTGAAGAAAGTAATTCTGTTCATCCTGATGCTACATGGTGTGAGACACCACTAGGTCATGCTGGCACAGTTGTGCATGAAAGCAGAGATGTGCCCTGTGATATTAAATCAAGAAACCCAGATATGAGCTGGTCACACCAGACAAAAGATACTCATGCTCAGTGGGACCGTAATTTGGATTATTTATCTGAAACCAGAGATGCGGCTAAGTGGCAATCTTGTGGAGATCCCATTAAAAGGCAGCTATCTGGCATTTTGGACAATGAATTTGAATCCAGGAGAGTTCAACAAACTTGTCCAGAGGAGTTATCACTCCTATATAAAGATCCTCAGGGTCACATTCAGGGCCCGTTTAAAGGAATTGATATTATTAGTTGGTTTGAGGCTGGTTACTTTGGTATAGATTTACCTGTTCGTCTGGAAAATGCAGCATCTGACTCACCATGGTTGCAACTTGGTGATGCCATGCCCCATTTACGAGCTAAGGCACAGCCACCACCTGGATTTTCTGCAGCAAAACACGACTCTACAGAGGCACTTGGTCGGCAAAACTCCAGTACCTTTGGGAACATGCATACTGGTTTAAGTGAGGTGGAGAGGCTGAGAAATGATTCTATGCATAGGAGTTCTGGCACAGAAGCTGAAAATAGGTTTTTAGAGTCACTCATGTCTGGTAGCAAGAGCAGTTCCCCACTTGATTGTTTCACATTATCGGAAGGTTTGCAAGGGTTTCTCAGTAATAATTCTGGTAATTTGGGCTCATCAAATAGTGGAAACAACCTTTACTTACTGGCCAAGAAGATGGCAATTGAACAGCAAAGATCCTTGTCAACTCATCCTTATCCATACTGGTCAGGGAGGGATGCAGCACCTGCACCCCTTCTGCCAAAATCAGAAAATTTTCCAAATGCACCACTGCATTCAAATATCTTGTCTTCTTTTAGTGACAATCCTCGTCAGCTTCAGCCCCAAAATTCTGAATTGAACTCAATAATCCAAGGATTGTCTGACAGGTCGTCCACAGGCTTAAATAGTGGTATTGCTGGATGGCCAAATTTTCATTTGCAAGGTGGATTGAATCCCCTTCAGAATAAGATTGACTTTCATCATGATCAAAATTATGTTCAAATGCCATTTGGAATTCAACAACAAAGACTACAAACACCGAACCAGTTGCCCTTGAATAACTTAACTGCTCAAACTTCAGATATTCCGTCTAGTATTTTGACAGCAGAGAAATTGCTTTCTTCTGGTTTATCCCAAGATCCCCACATGTTGAATATGTTGCAGCAGCAACACTTGCTGCTGTTGCATTCTCAGGCAACTGCTTCTTCACAACCAACTTTGTTAGATAAACTTCTATTACTAAAGCAGCAACAGCAACATGAGGAGCAACAACTGATATTGCACCAACAACAGCAACTGCTATCTCAAGTGCTGCAGGATCATCAGACTCACCAGCGCCTTGGTGATTTATCTTATCAACAGGTGCAGGGAGGTGGAATACCAGTGGGGAATTTGCATGTGAATGTTTCTGAAATTCAACCACCAAAAGACATTTTTTCCATGAGTTCTCAGACACCAATTACCAGTGTGCATGGTGAGCTTACTACTAATTCTTTGGATTTACCTCTGCAATTAAGCAATCAGGACACTAGCGATAATATAAACAGTGAATCTTCTGCCAATCTCCCTGACCAATTATTTGAGAACATTGGTCCTCAAAAAAGCTGGAGTGCTACACTTCCTGAGCAAATTAATGACAAACACCAGAATGAAACATTGGAAGCATCAAATGCACATAACATAGTTAAAGAGGAACCCGAAATTGCCCATAAACCCCTTCCTTTTTCTCACTATACTGCTAAAATCATGGAGCAGATGCCAGACAAAACTTATCCAGCTGATGATACTCATGTGAGTGTAACTTCTGAGTCTGGTGAGAATTCTCAACCATTACAGCATGTTACACCTGTTGTTCCTGTGTCTTCAGCTGGATCTTGTGGTACTGAGTTACCACTATCTAGTCAACTGAGTATAAATGTGGAGATTAAATCAGATAGTCTTGTAGAGCAGCAGTGTGGAAGAGAGAGCTCAAATATTGAGCCCTCTGTGGTAGACGTGAGAAGTGTTGAAGCACTGGAACCCAAAAAGACTACTGAGAAGAAAACAAAGAAGCAAAAATCTTCAAAATCTCAGTCTTCTGAGCAGGCAAAGGGATTTCCAAAAAATGTTACTTCACACCAGTCAAAGAGATCAGAAACTGAGAAGCCAAATTATAGTGAAATTTTTTTGGGAGAAACCACCAAGGGTGAACCAGTCCATGAGACATATCTGCAACAAACAAGTGGTAAGGGTAAACAATCTACAACTGCTAATGATCATCAAGAAGTTAATGGTGTCCCTACTAATACTTCAGGAAGTATCACTGAAACATGTGTTGGGAATGAGTTGAAGGAAGTGAGTTTTGTTCCCACCCAGAATACTGAATTACCTTCAGGGAGAGCATGGAAACCTGCTCCAGGTTTCAAAGCAAAATCTCTCTTAGAAATTCAACTGGAAGAACAAAAAAAGGCACATAAAGAAGTGCTGGTGTCTGAGGTTGCTACACCTGTCATTTCCATGAGTTCAACAAGTCCCTCGGTTGGAGTTGTGGCCAATCCAGACTCTATGAACTTGTGTAATGATAGTCACAGAGAAGCAGATAATACTGAATATCTGGCTAAATCTGAAAAATCTCAGTATAGTAAAACCAAGAAAAGCCCATTACATGATCTAATGGTAGAAGATGTACCAAAATCTAGTGAAAGAGATGGCATGGTTCCAGACAGTATGATCCCCTCACAAAATATAGCTGTTCATTCTCAATCGAAACCAATAGATGAAGGAGACTTCATTGAAGCTAAAGACACAAAAAGAAGCAGGAAAAAATCTGCAAGGTTGAAGGGTTCAGGGGCTAAGGTTTCAATTCCTGTTGCTTCTAGCGAAATGCCCATTAGTTCAAGTCACATTGAAAAGGTAAAAAGCTCCCCTTCTGCTCCGCTTGAGAAAGAACAACTGCCTTCTATCCCTTCAGGACCCTCTCTGGGAGATTTTGTTCTTTGGAAAGGAGAGCCAACAAGCCCATCTCCTCCACCAGCGTGGACTGCTGATTCTGGTAGGATTCCTAAACCGACATCATTAAGGGACATTCAAAAGGAGCAGGAGAGGAAGTCCGGTGCAGTTCTCCCAAACCAAATGCCTATCCCTCAGAAATCACAGCCTGCCCAAGTTGCTCGGAGTAGCAGTTCTTCATGGCCAATTTCAACTTCATCTCCATCAAAAACTGTACCTTCTAGCCTGATAAACTCTCAAGCTTCTCTGTCAAAATATAGAGGGGATGATGAATCGTTTTGGGATCCAGTTGAACAATCTAAGCAAGAAAATAAACAATCATGTTTCTCTCAGATTGCTAGCCAGGGAAGTTGGGTTTCTAAAAATGTCCCCATGAAAGGTAATTCACCTGGATTACTGAGTCGACAAAAATCTGGGAGTGGCAAACCAGTTGAGCGATCTCTATCATTATCACCTGCCTTTTCTCAGTCACTGCTAAAACTTAAAAAGGATGCCATGACTAAGAATTCTGAAGCCATGGACTTCAGAGTCTGGTGTGAGAATGAATGTGTCAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAGTTTTGCTTGAAGCAGTCCAGATCTGAAGCAGAGATGATTCTCACAGAAAACCTGGGATCATATGACCCTGATCATGAATTCATTGATAAATTCCTCAATTACATGGACTTGCTACCATCAGATGTTTTGGAAATAGCTTTTCAAACTCGGAATGATCAGAAAGATGTTGGATCTGAAAATACAGTTGTGCAAGATACAGGCTACACTGACGGATCCTTCGCAAAAGGTGGAAAGAAGAAAGGTAAGAAAGGAAAAAAAGTCAGCTCTGCAGTTCTTGGATTCAATGTCGTGAGTAACCGCATCATGATGGGTGAGATCCAGACGCTGGATGACTAA 5316 0.4225 MADRISATRLHHISAAPPFQISKDFHGTDNPIPLSPQWLLPKSGESKPAIGTVENHVISTPRNGNRSEMVKMSGNGEDVNDGHKRKDVFRPSMLDSESGRRDRWRDEERDTKSSLHKDSWRNGDKDLTDTRRMDRWSENPSTRHFGETRRGSSDRWNDLGNKDTNFEQRRESKWNTRWGPDVKEPEGLREKWSDPGKEGDLDVGKRLSNISNLVKDEKEGDHYRPWRPNFSQSRGRVEPTQHQNMMPNKQVESKPLSYGWATGEDTPPVIAFGRARFGSGSNSINNTYMDSQYPGTLLDKVESEHVEARSFRYSRTNLLDVYRVADMHRNRKLVEFEQVPSITQDEPLEPLGFCAPNSEEQSVLNDIDKGEIISSSAPQVPKDGRNSTEFTHSRRTKLVNAPFQDRVEDNGSYRMVDEVPSNRESTIEESNSVHPDATWCETPLGHAGTVVHESRDVPCDIKSRNPDMSWSHQTKDTHAQWDRNLDYLSETRDAAKWQSCGDPIKRQLSGILDNEFESRRVQQTCPEELSLLYKDPQGHIQGPFKGIDIISWFEAGYFGIDLPVRLENAASDSPWLQLGDAMPHLRAKAQPPPGFSAAKHDSTEALGRQNSSTFGNMHTGLSEVERLRNDSMHRSSGTEAENRFLESLMSGSKSSSPLDCFTLSEGLQGFLSNNSGNLGSSNSGNNLYLLAKKMAIEQQRSLSTHPYPYWSGRDAAPAPLLPKSENFPNAPLHSNILSSFSDNPRQLQPQNSELNSIIQGLSDRSSTGLNSGIAGWPNFHLQGGLNPLQNKIDFHHDQNYVQMPFGIQQQRLQTPNQLPLNNLTAQTSDIPSSILTAEKLLSSGLSQDPHMLNMLQQQHLLLLHSQATASSQPTLLDKLLLLKQQQQHEEQQLILHQQQQLLSQVLQDHQTHQRLGDLSYQQVQGGGIPVGNLHVNVSEIQPPKDIFSMSSQTPITSVHGELTTNSLDLPLQLSNQDTSDNINSESSANLPDQLFENIGPQKSWSATLPEQINDKHQNETLEASNAHNIVKEEPEIAHKPLPFSHYTAKIMEQMPDKTYPADDTHVSVTSESGENSQPLQHVTPVVPVSSAGSCGTELPLSSQLSINVEIKSDSLVEQQCGRESSNIEPSVVDVRSVEALEPKKTTEKKTKKQKSSKSQSSEQAKGFPKNVTSHQSKRSETEKPNYSEIFLGETTKGEPVHETYLQQTSGKGKQSTTANDHQEVNGVPTNTSGSITETCVGNELKEVSFVPTQNTELPSGRAWKPAPGFKAKSLLEIQLEEQKKAHKEVLVSEVATPVISMSSTSPSVGVVANPDSMNLCNDSHREADNTEYLAKSEKSQYSKTKKSPLHDLMVEDVPKSSERDGMVPDSMIPSQNIAVHSQSKPIDEGDFIEAKDTKRSRKKSARLKGSGAKVSIPVASSEMPISSSHIEKVKSSPSAPLEKEQLPSIPSGPSLGDFVLWKGEPTSPSPPPAWTADSGRIPKPTSLRDIQKEQERKSGAVLPNQMPIPQKSQPAQVARSSSSSWPISTSSPSKTVPSSLINSQASLSKYRGDDESFWDPVEQSKQENKQSCFSQIASQGSWVSKNVPMKGNSPGLLSRQKSGSGKPVERSLSLSPAFSQSLLKLKKDAMTKNSEAMDFRVWCENECVRLIGTKDTSFLEFCLKQSRSEAEMILTENLGSYDPDHEFIDKFLNYMDLLPSDVLEIAFQTRNDQKDVGSENTVVQDTGYTDGSFAKGGKKKGKKGKKVSSAVLGFNVVSNRIMMGEIQTLDD 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1120 1233 - -
Spst9g00384 1771 Pfam GYF domain 533 569 IPR003169 GO:0005515
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1583 1612 - -
Spst9g00384 1771 Gene3D - 517 603 IPR035445 -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 58 203 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1359 1540 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 603 617 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1159 1174 - -
Spst9g00384 1771 CDD GYF 528 585 IPR003169 GO:0005515
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1137 1158 - -
Spst9g00384 1771 SMART gyf_5 529 584 IPR003169 GO:0005515
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1505 1540 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1200 1233 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1386 1400 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1551 1570 - -
Spst9g00384 1771 ProSiteProfiles GYF domain profile. 528 579 IPR003169 GO:0005515
Spst9g00384 1771 MobiDBLite consensus disorder prediction 77 203 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 218 241 - -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 1420 1434 - -
Spst9g00384 1771 SUPERFAMILY GYF domain 518 585 IPR035445 -
Spst9g00384 1771 MobiDBLite consensus disorder prediction 590 617 - -
Spst9g00384 1771 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00384 Spst-Chr9 3412173 3421059 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00384 9 3412173 3421059 Spst9g00384 9 3412173 3421059 ECH
Spst8g01893 8 23790533 23798888 Spst9g00384 9 3412173 3421059 PCT