Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00358 ATGATGGTGAAGAGTCGGTTGGTTTTGGTTTTCTTGGTTCTGTTTGTGACGGTGGAGCAGAGTAAGGTGCTCCAGGTAGAAGCAGATGATGGTGGGTTTGTGAAAGCAAGAGGAGTGCAGCTTACGCTGAATGGAAGCCCCTACTATGCTAATGGCTTCAATGCCTATTGGCTAATGTACATTGCTTCTGATCCTTCTCAGAGAAACAAAGTCTCCTCAGCCTTTCAACTGGCTTCACGTCATGGACTCAACATAGCCAGAACTTGGGCTTTCAGTGACGGTGGCTATAAGCCCCTACAATACTCTCCTGGATCCTACAATGAGCAAGTCTTCCAGGGATTGGATTTCGCAATAGCCGAAGCAAGAAAATATGGGATCAAGCTGGTTCTGAGTTTGGTGAATAACTATGAGAACATGGGTGGCAAGAAACAGTATGTAGAATGGGCAAGGAGTCAGGGACAGTCCATAAATTCTGAAGATGACTTCTTCACAAATCCTGTGGTGAAGGGATTCTACAAAAACCACATCAAGGCTGTTCTTACAAGACGTAATAGCGTGACTGGAATTGCTTACAAAGACGATCCAACTATAATGGCTTGGGAACTAATGAATGAGATTCGGTGTCCTTCTGATCAATCAGGAAAAACGGTGCAGGCTTGGATTACTGAGATGGCATCTTACCTGAAATCCGTAGATGGAAACCACTTGCTGGAAGCAGGTTTGGAGGGTTTCTACGGCCAGTCAAAGCCACAGTCCAATCCAAACTTCAACGTAGGAACCGATTTCATTGCAAACAACCAAATCCCTGGCATTGATTTCGCAACAGTGCACTCCTACCCGGACCAATGGCTATCGAGTTCAGGATTTGAAGAGCAAATCTCATTCTTGGGCCGGTGGGTGGATGAGCACATCCAAGATGCACAGAACACTCTTCACAAGCCAGTTCTCTTTGCGGAGTTTGGTATTTCCACAAAAAACTTCGGTGGCAACCCATCACCCAGGGATCGGTTATTCAACACGGTATATTCTGCAATATACTCATCCGCAAGTAGTGGCGGTGCTGCCGTTGGTGGCTTGTTTTGGCAGCTTCTAACTCAAGGTATGGATTCTTTTCGAGATGGATACGAGGTGATCTTAGATGAAAGCCCCTCAACCGCTACTTTGATCGCTCAACAGTCTCAAAAACTAAACCGCATTCGCAAGATGTACGCCAGACTCAGAAACATTGAGAAGTGGAATAGGGCTAAGGAAATTAGAGGCTCACAATGGCATGTTGGTGCTAACGGTGGAAACTGA 1296 0.4591 MMVKSRLVLVFLVLFVTVEQSKVLQVEADDGGFVKARGVQLTLNGSPYYANGFNAYWLMYIASDPSQRNKVSSAFQLASRHGLNIARTWAFSDGGYKPLQYSPGSYNEQVFQGLDFAIAEARKYGIKLVLSLVNNYENMGGKKQYVEWARSQGQSINSEDDFFTNPVVKGFYKNHIKAVLTRRNSVTGIAYKDDPTIMAWELMNEIRCPSDQSGKTVQAWITEMASYLKSVDGNHLLEAGLEGFYGQSKPQSNPNFNVGTDFIANNQIPGIDFATVHSYPDQWLSSSGFEEQISFLGRWVDEHIQDAQNTLHKPVLFAEFGISTKNFGGNPSPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLLTQGMDSFRDGYEVILDESPSTATLIAQQSQKLNRIRKMYARLRNIEKWNRAKEIRGSQWHVGANGGN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00358 431 SUPERFAMILY (Trans)glycosidases 33 388 IPR017853 -
Spst9g00358 431 PANTHER - 6 419 IPR045053 GO:0004553
Spst9g00358 431 Pfam Cellulase (glycosyl hydrolase family 5) 66 326 IPR001547 GO:0004553|GO:0071704
Spst9g00358 431 Gene3D Glycosidases 29 400 - -
Spst9g00358 431 Coils Coil 389 409 - -
Spst9g00358 431 FunFam Mannan endo-1,4-beta-mannosidase 6 30 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00358 Spst-Chr9 3282240 3285114 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00358 9 3282240 3285114 Spst9g00358 9 3282240 3285114 ECH
Spst8g01932 8 25059543 25064051 Spst9g00358 9 3282240 3285114 PCT