Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00329 ATGCTAAAATCAGGCATGGAAATTGAGGAGAAAAAACAGGTGAAAAGAACAGCACAGGCCAGCTCCCGGAAGGGATGCATGAGAGGCAAAGGAGGTCCTGAAAATGCCAGTTGCACCTACAAAGGTGTGAGACAGAGAACCTGGGGAAAATGGGTTGCTGAAATCCGTGAACCCAACCGAGGTGCAAGACTCTGGCTCGGGACATTTGAAACCTCTCATGATGCTGCTTTGGCTTATGATGCTGCAGCACGCAAGCTTTATGGCCCTGATGCCAAACTCAATTTACCAGACCTCTCTCTGTCCTCAATAAAATCATCTCAATCACAATCTCAGTGTCCACCACCACCTCCTGATACCAGCACTCAAATTCCTCACACGGAGAACCTGCAACAGCCTCAAATGCAAAACAAAATAGACATGACAACTTCTTCTAATTTCAATTTTAATCCTGCAGTCTCCATGGCCTCTCAGGAAGTTGGAATTACTCCAATTTACACCAGTGACTGCATTGTGTCTCTTCCCATGGACACCAATCCTAAACCAATTGAAACTTACACAAAACCTGTGGAGATCGAGGGAGAGTTTTGTCCATCTTGGGACACAATGAATGAGGGTTTACCTGTTTTTGATGATTCTATCTGGGCTGAAGCTGCTATGTCTCTAGATTTTTCTCTAATTCCAGAAGAGACTGAGATTTACACACAGGAGAACAACTTGGCAGATGTGAATACGTGGGACCCTCAAACTCCATGGTGCATGTAA 762 0.4501 MLKSGMEIEEKKQVKRTAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHDAALAYDAAARKLYGPDAKLNLPDLSLSSIKSSQSQSQCPPPPPDTSTQIPHTENLQQPQMQNKIDMTTSSNFNFNPAVSMASQEVGITPIYTSDCIVSLPMDTNPKPIETYTKPVEIEGEFCPSWDTMNEGLPVFDDSIWAEAAMSLDFSLIPEETEIYTQENNLADVNTWDPQTPWCM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00329 253 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Spst9g00329 253 MobiDBLite consensus disorder prediction 102 125 - -
Spst9g00329 253 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Spst9g00329 253 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Spst9g00329 253 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Spst9g00329 253 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Spst9g00329 253 MobiDBLite consensus disorder prediction 1 17 - -
Spst9g00329 253 MobiDBLite consensus disorder prediction 1 38 - -
Spst9g00329 253 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 12 204 - -
Spst9g00329 253 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Spst9g00329 253 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Spst9g00329 253 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Spst9g00329 253 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00329 Spst-Chr9 3131579 3132340 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst9g00329 AP2 3.2e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00329 9 3131579 3132340 Spst9g00329 9 3131579 3132340 ECH
Spst8g01965 8 26377135 26377941 Spst9g00329 9 3131579 3132340 PCT