LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst9g00310	ATGTCGGAAACGATGAGCAAAAACGACGTCGGATTGACGTCCACGACGTCGAGAAGGTTCTGGCCTCGTTGGATTCCCACTTCCATCGATCATATCATCGCTTCCGAGAAGCGCCTTCTCTCCGTCGTCAAAACCGGTTATGTTCAAGAGCATGTTAACATAGGTTCTGGTCCTCCTGGCTCCAAAGTGAGATGGTTCCGTTCAGCCAGTAACGAGCCGCGGTTTATTAACACCGTTACATTTGACAGTAAACCTGATTCTCCTACGCTTGTGATGATTCATGGTTATGCTGCTTCCCAGGGGTTCTTTTTTCGCAATTTTGATGTGCTTGCCTCTCGATTTAGAGTCATTGCTGTTGATCAACTTGGATGGGGTGGATCAAGCAGACCTGATTTTACTTGCAAAAGCACTGAAGAAACTGAAGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACTTGAGCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCTAAATATGCGCTCAAGCACCCTGAGTATGTACAACACTTGATTCTGGTTGGATCTGCTGGATTTTCATCAGAATCAGATACAAAGTCTGAGTGGGTTACAAGGTTTCGAGCAACATGGAAGGGAGCAGTTCTGAACCATCTATGGGAATCTAATTTTACACCTCAAAAACTTGTCAGAGGTTTAGGTCCTTGGGGTCCCAACATAGTCCGCAGGTATACAAGTGCTAGGTTTGGTACACATTCCACTGGTGAAATACTGACGGAAGAGGAATCAACATTGCTGACAGATTATGTTTACCACACATTGGCGGCCAAAGCTAGCGGGGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCTAGAATGCCCCTTCTGCTCAGTGCCTCTGAGTGGAAGGTGCCCACTACTTTCATGTATGGTTTCCAAGACTGGATGAATTATCAAGGTGCCCAAGAAGCTCGTAAGCATATGAACGTTCCATGCGAAATCATCAGGATTCCTCGGGCCGGGCACTTTGCGTTCATTGACAACCCAACTGCCTTCCATTCAGCTATTTTTTATGCTTGTCGAAGATTTTTTTCACCTGATCCAGACAATGAACCTCTTCCTGAAGGGTTAACCTTTGCATAG	1155	0.445	MSETMSKNDVGLTSTTSRRFWPRWIPTSIDHIIASEKRLLSVVKTGYVQEHVNIGSGPPGSKVRWFRSASNEPRFINTVTFDSKPDSPTLVMIHGYAASQGFFFRNFDVLASRFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEYVQHLILVGSAGFSSESDTKSEWVTRFRATWKGAVLNHLWESNFTPQKLVRGLGPWGPNIVRRYTSARFGTHSTGEILTEEESTLLTDYVYHTLAAKASGELCLKYIFSFGAFARMPLLLSASEWKVPTTFMYGFQDWMNYQGAQEARKHMNVPCEIIRIPRAGHFAFIDNPTAFHSAIFYACRRFFSPDPDNEPLPEGLTFA	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst9g00310	384	PRINTS	Alpha/beta hydrolase fold signature	162	175	IPR000073	-
	Spst9g00310	384	PRINTS	Alpha/beta hydrolase fold signature	176	189	IPR000073	-
	Spst9g00310	384	PRINTS	Alpha/beta hydrolase fold signature	113	128	IPR000073	-
	Spst9g00310	384	PRINTS	Epoxide hydrolase signature	308	324	IPR000639	GO:0003824
	Spst9g00310	384	PRINTS	Epoxide hydrolase signature	341	363	IPR000639	GO:0003824
	Spst9g00310	384	PRINTS	Epoxide hydrolase signature	176	189	IPR000639	GO:0003824
	Spst9g00310	384	PRINTS	Epoxide hydrolase signature	113	128	IPR000639	GO:0003824
	Spst9g00310	384	PANTHER	RE40534P-RELATED	17	361	-	-
	Spst9g00310	384	FunFam	Probable 1-acylglycerol-3-phosphate O-acyltransferase	74	364	-	-
	Spst9g00310	384	Pfam	alpha/beta hydrolase fold	88	204	IPR000073	-
	Spst9g00310	384	SUPERFAMILY	alpha/beta-Hydrolases	78	360	IPR029058	-
	Spst9g00310	384	Gene3D	alpha/beta hydrolase	61	361	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst9g00310	Spst-Chr9	2967829	2972677	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst9g00310	9	2967829	2972677	Spst9g00310	9	2967829	2972677	ECH
	Spst8g01979	8	26818739	26822778	Spst9g00310	9	2967829	2972677	PCT