Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00307 ATGACCCCTTCACTTTCCCTCCATATTATTCCTCTTCTCATTTTTCACATCCTCCTCGTAGCACCGCCTTCGCCGGCGGAAGCAGGCAAGGGACAGTGGCACCTCCTCCAAGAGAACATCGGCATTGTCGGCATGCACATGCAGCTCCTGCACAACGACCGTGTCATCATGCTAGACCGCACCGACTTCGGATTATCCAACCTAACCTTCCCCAACGGTAGATGCCGCAACAACCCACAAGAGATGGTCGTCAAAACCGACTGCACCGCACACTCCGTCGAATACGACGTCGCAGCCAACACAGTCCGCGCGCTCTTCGTCCAAACCAACGTCTGGTGCTCCTCCGGTTCGGTTTCTCCCGACGGAACATTAGTCCAAACCGGTGGCTTCAACGACGGAGACCGTACGGTAAGAACCCTCACCCCGTGCCGCATGTGCGACTGGCGCGAAGTTAACAATGAACTCGCGGCAAGAAGATGGTACGCCACCAATCAGATCTTGCCAGATGGACGACAAATAATAATTGGTGGAAGAAGACAGTTCAACTACGAGTTTTACCCCAAGACACAAACCACGGTTAAGAACACTTACAGTTTACCTTTTCTCGTTCAAACAAACGACGCCTTAGCGGAAAATAATCTCTACCCCTTTGTTTTCTTAAACGTCGATGGCAACCTTTTCATCTTCGCTAACAACCGCGCTATCTTATTCGATTACAATAAGAACCGCGTCGTCAAAACCTACCCTCAAATACCCGGTGGAGACCCACGCTGCTATCCTAGCACCGGTTCCGCGGTTTTGCTTCCGTTGAAGAAACTTCGAGAATCGAACGTGGAAGCTGAGGTTTTAATTTGCGGTGGAGCCCCGAGAGGAGCTTTTCTGGATTCCCTCTCCGGTCGGTTTACCGGAGCCTTAAAAACGTGCGCTAGGATGAAAATAACCGACCCGAGTCCGAGGTGGGTGATGGAAACCATGCCGGGTGCGAGAGTCATGAGTGACATGATTTTGCTCCCAAACGGTGACATTTTGATTATTAATGGAGCTTCTGTAGGGACTGCGGGCTGGGAACTGGGGCGGGACCCTGTGTTGAATCCGTTTCTTTATAAACCAAATAACCGGGTCGGGTCGAGATTTGAGCTCCAAAACCCGTCTAATATTCCGCGAATGTATCACGCGAGTGCCGTTTTGCTTCGTGATGGTCGCGTCCTTGTGGCTGGGAGCAACCCTCACACGTATTACAATTTCACCAACGTGATGTTCCCAACGGAATTACGGTTGGAAGCGTTTTCACCTTCGTATCTTGAGCCCGGGTTCTCTAACGTGCGTCCCACAATAGTGTCCCCTGCGTCCCAAACAAAAGTGAAGTACGGTGAGACGTTGAAGGTTGGGTTTGAGGTGACCGGGAGTTTGGTTAAGGATTCGGTGTCGGTTACGATGCTGGCGCCGCCTTTTGCCACGCACTCGTTCTCCATGAACCAGAGGTTGTTGGTTTTGGAGCCGCAGGGTTTGAGGCAGGTTGGGAAATCGACGTCGTACGAGGTTGAAGTTAAGGCGCCGGGTTCCAGTGTTCTTGCACCACCGGGTTTCTATCTGTTGTTTATGGTTCATCAAGAAATCCCAAGCCAGGGTATTTGGATTCTTAGGTGGGCATTTATTAACTGTAAGATATGA 1671 0.5111 MTPSLSLHIIPLLIFHILLVAPPSPAEAGKGQWHLLQENIGIVGMHMQLLHNDRVIMLDRTDFGLSNLTFPNGRCRNNPQEMVVKTDCTAHSVEYDVAANTVRALFVQTNVWCSSGSVSPDGTLVQTGGFNDGDRTVRTLTPCRMCDWREVNNELAARRWYATNQILPDGRQIIIGGRRQFNYEFYPKTQTTVKNTYSLPFLVQTNDALAENNLYPFVFLNVDGNLFIFANNRAILFDYNKNRVVKTYPQIPGGDPRCYPSTGSAVLLPLKKLRESNVEAEVLICGGAPRGAFLDSLSGRFTGALKTCARMKITDPSPRWVMETMPGARVMSDMILLPNGDILIINGASVGTAGWELGRDPVLNPFLYKPNNRVGSRFELQNPSNIPRMYHASAVLLRDGRVLVAGSNPHTYYNFTNVMFPTELRLEAFSPSYLEPGFSNVRPTIVSPASQTKVKYGETLKVGFEVTGSLVKDSVSVTMLAPPFATHSFSMNQRLLVLEPQGLRQVGKSTSYEVEVKAPGSSVLAPPGFYLLFMVHQEIPSQGIWILRWAFINCKI 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00307 556 CDD E_set_GO_C 437 546 IPR015202 -
Spst9g00307 556 SUPERFAMILY Galactose oxidase, central domain 93 435 IPR011043 -
Spst9g00307 556 Gene3D Immunoglobulins 441 549 IPR013783 -
Spst9g00307 556 Pfam Glyoxal oxidase N-terminus 45 287 IPR009880 -
Spst9g00307 556 PANTHER SECRETED PROTEIN-RELATED 23 546 - -
Spst9g00307 556 Pfam Galactose oxidase-like, Early set domain 442 546 IPR015202 -
Spst9g00307 556 Gene3D - 27 437 IPR037293 -
Spst9g00307 556 FunFam Aldehyde oxidase GLOX 27 440 - -
Spst9g00307 556 SUPERFAMILY E set domains 438 546 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00307 Spst-Chr9 2893755 2895532 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01983 8 26881591 26883255 Spst9g00307 9 2893755 2895532 PCT