Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00306 ATGACTACCCTTCATCTTCTACCTACCATCATGCTCTTCCACCTTCTTTTCCTCTCCATTATCTTTCCCTTTCCCTCCGTAGCCTCCAACAACGCCCAATGGCAGCTTCTACACAAGAACATCGGCATCGTTGCCATGCACATGCAGCTCCTCAACAACGACCGTATCATCATCTTCGACCGCACCGACTTCGGCTACTCCAACCTCACCCTCCCCAATGGCAAGTGCCGCAGCGACCCCTCCGACAAAGTTCTCGAAACAGATTGCACCGCTCACTCAGTCGAATACGACGTAGCATCCAACACCTTCCGCGCCCTGTTCGTTCAAACCGACGTCTGGTGCTCCTCCGGCGGAGTCATCGCAGACGGCACCCTCATCCAAACCGGCGGATACAACGACGGCGAACGCAAAGTAAGGTCCTTCGCTCCATGTGAATCGCCTGAGGACTGTGAGTGGCAAGAAACCGACAATGCCCTCGCCGTAAGAAGATGGTACGCCACCAATCACTATTTACCAGATGAACGACAGATTATAATCGGAGGAAGAAGGCAATTCAACTACGAGTTCTTCCCCAAGAGAAAAATAACAGAGAATAACAAACCCTTCGTGTTACCGTTTCTGGTACAGACCAATGATAAGGGTGCAGAGAATAATCTTTATCCCTTTGTTGTTTTAAACGTGGACGGAAATCTTTTTATTTTCGCCAACAACCGTGCGATTCTGTTTGATTACCAGAACGACGCCGTTGTGAGAACGTACCCCGAGATACCCGGGGGAGACCCTAGGTCTTATCCTAGTACCGGTTCCGCGGTTTTGCTACCTTTGAAGAATTTGGAAGCGGCGAGGGTGGTGGCTGAGGTTTTGGTATGCGGTGGGGCCCGCAGAGGGGCTTATCAGCTTGTGCCCAGGGGAGTTTTCTCCCAAGCGTTGGATTCTTGCGCAAGGATTAAGATCACGGATCCGAATGCCACGTGGGTGGTGGAGACCATGCCGATGGGGCGCGTGATGAACGACATGGTCCTGCTCCCCAACGGCGACGTTTTGATTATAAACGGAGCTAAATCGGGAACGGCGGGGTGGGAGAAGGCGGATAATCCGGCTCTTGAACCGGTTATATATAAACCAAACGGTTCAGTTGGGTCGCGGTTCGTGCTGCAACCCGCTTCGAACATTCCTAGGATGTACCATTCGACGGCCATTTTGGTTCGTGATGGAAGAGTTATCGTAGGTGGGAGCAACCCTCACGAGAAATACATGTTCTCAAATGTGTCGTACCCTACGGAGTTGAGTTTGGAAGCGTTTTCTCCTCAGTATTTGGACTCTCAGTTTTCACCTCTACGTCCCATTATTTTAGAGCCTTCTTCTCATGCGAACTTGATTTATGGCGAGAAATTCAAGATGAGTATTGAGGTGAAAGGAACCCTTGTGCCTGAGTTATTGTCCGTGACGATGTTTGCGGCGCCATTTAACACGCACTCTTTTTCCATGAATCAAAGGTTGTTGGTGTTGTCGATGGGTGAAGTTAAGGTTAGGGGGAATTCGAGTTGTGAATTTGAGGTGACGGCGCCTGGTTCAGCTGTTCTTGCACCACCCTCGTTTTATATCATATTTGCAGTTCATCAACACGTTCCTAGCGAGGGAGTTTGGATCAAGATGCAATGA 1662 0.5006 MTTLHLLPTIMLFHLLFLSIIFPFPSVASNNAQWQLLHKNIGIVAMHMQLLNNDRIIIFDRTDFGYSNLTLPNGKCRSDPSDKVLETDCTAHSVEYDVASNTFRALFVQTDVWCSSGGVIADGTLIQTGGYNDGERKVRSFAPCESPEDCEWQETDNALAVRRWYATNHYLPDERQIIIGGRRQFNYEFFPKRKITENNKPFVLPFLVQTNDKGAENNLYPFVVLNVDGNLFIFANNRAILFDYQNDAVVRTYPEIPGGDPRSYPSTGSAVLLPLKNLEAARVVAEVLVCGGARRGAYQLVPRGVFSQALDSCARIKITDPNATWVVETMPMGRVMNDMVLLPNGDVLIINGAKSGTAGWEKADNPALEPVIYKPNGSVGSRFVLQPASNIPRMYHSTAILVRDGRVIVGGSNPHEKYMFSNVSYPTELSLEAFSPQYLDSQFSPLRPIILEPSSHANLIYGEKFKMSIEVKGTLVPELLSVTMFAAPFNTHSFSMNQRLLVLSMGEVKVRGNSSCEFEVTAPGSAVLAPPSFYIIFAVHQHVPSEGVWIKMQ 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00306 553 SUPERFAMILY Galactose oxidase, central domain 80 440 IPR011043 -
Spst9g00306 553 FunFam Aldehyde oxidase GLOX 28 445 - -
Spst9g00306 553 Pfam Glyoxal oxidase N-terminus 46 292 IPR009880 -
Spst9g00306 553 Pfam Galactose oxidase-like, Early set domain 447 551 IPR015202 -
Spst9g00306 553 PANTHER SECRETED PROTEIN-RELATED 27 552 - -
Spst9g00306 553 Gene3D Immunoglobulins 446 553 IPR013783 -
Spst9g00306 553 CDD E_set_GO_C 443 552 IPR015202 -
Spst9g00306 553 Gene3D - 28 443 IPR037293 -
Spst9g00306 553 SUPERFAMILY E set domains 444 552 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00306 Spst-Chr9 2887750 2889411 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00306 9 2887750 2889411 Spst9g00306 9 2887750 2889411 ECH
Spst9g00306 9 2887750 2889411 Spst8g01983 8 26881591 26883255 PCT