Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00298 ATGGAATTGATTTTCGAGTTTGCACCACAGTCTTTTGCGATGGATCGGCGCTGGCCTTGGAAGAAAAAATCATCAGAGAAGGCCGTGATTGAGAAAGCAGCTACTGCATTGGATTCCTCCGATGCTTCCAACAACCAGGATAACAAGAAGAAACCAAACTACATCCAAATCTCTGTGGAATCCTACTCACATCTGTCTAGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACACTGGAGGATGAGGTCAAGGAAATTAATGAAAAGCTGTCCGCAGCAAATTCTGAGATCAATACCAAGGAAAGCATGGTAAAGCAACATACTAAAGTAGCTGAAGAAGCTGTATCTGGCTGGGAAAAGGCTGAAGCTGAGGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACTCTTTTGAAACTCACTGCTGAGGATCGTGCAACACATTTAGATGGCGCTCTTAAAGAGTGTATGCGACAAATACGAAACCTTAAGGAAGAACATGAGCAGAAAATACAGGAAGTTGCTCTCTCAAAAACCAAGCAATTAGACAAGATTAAGGGGGAGCTCGAGGCAAAGATAGTGAATTTTGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAGCACTCTAACATGCTAATCAAATTCAGTGAAGAAAAGGCTCGTGCTGAGGCTGAAATTGAGATTCTCAAGGGCAACATAGAAGCATGTGAAAGGGAAAATAATTCACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATCGAGGGCGTAAAAAAAATTGCTAAGTTAGAGGCTGAGTGCCAACGATTACGAGGTCTTGTGAGGAAAAAGTTACCAGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGCCTTGGCCGAGATTTTGGAGAAAGCCGATTAAGGAAGTCCCCTGTGAAGTCTCCTTCCCCTAATTTGTCTCCACTACCTGATTTCTCCCTGGAGAATGTGCAGAAATTCCAGAAGGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGCGCAAAAACAGTGAGCAAACTTCAAATTTTGGAAGCCCAATCTCAGGCTAGGAACCAGCTGAAAGGATCTCCAAAATCCATCGTCCAGATAACTCATGAAAGCTTATATAATCAAAACGCAAGCAGCGCACCAAGCTTTGTCTCCATGTCTGAAGATGGAAATGACGATGCAGTAAGCTGTGCTGAATCTTGGTCTACAGCAATAGTCTCTGGGATATCCCAATCGCCCAATGAAAAATGCACTGAGGAATCGAGAAAATCTGAAGTCTCTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTCTGTCAAATGAGTCCAATGTAGATGCCACTGTTTCAGTTTCCTCAAACAATAAGACAACTGACACTGGGACTGATAATGTATCAGAAGTTGGAACTGGCAAAGAAGGTCTAGCTGAAAAGATTGGCAATTCAAATTCATTGCCAAATCAAGTGTCTTCTGATGCTTTGATGTCAGTACCCGATCCTCAATCTGATGCTAGTGGCTTGTTATTAACAGAACTTCGATCAAGAATATTACTGGTTTTTGAGTCCTTAGCCAAGGATGCTGACATAGGGAAAATTGTGGAGGATATTAAACATGTGCTTGAAGATTCGCATGACACTACCATCAGCCACTCGGTGAATGCCCATCCTTCTGATGCTATATGTGACAGGAAGGATAATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGAAATCATTTCATCCCAGCAACCCAAACAATATGTGCATATAACTTCAGATCTGGAAGTTGCAATTTCTCAAATTCATGACTTTGTATTATTCCTTGGCAAGGAAGCAATGACATTTCATGACATATCTTGTGATGGAAATGAAATGAGGCAAAAGATTGAGGAGTTCTCCGTCACATTTGATAATCTATTAAGCAACAATGCAAGTTTGCAACAGTTTGTTCTTGACTTGTCCTATGTTTTAGATAAAGCAAGTGAGTTCAGATTTAATGTACTTGGCTACAAGGGCACAGAAGCTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTGCAAGACAATTCACCTGGAGAAAGATATCAAAATGGCTGTTCCCATATTCTTAATACGTGTTCTAATCCTGAGGTTCCCGATGATGGAAATTTGGTCTCAGGCTATAAAGTGGATGATGCATCACAAAAACTGTCAATGCAAGAGTTTGAAAAATTGAAACTAGAGAAAGAAAAAGTAGTGACTGATCTGTCAAATTGTACTGAAACTCTGGAAATGACCAAGTCTCAGTTGCTAGAGACTGAACAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCAAAAATCAAACAGCTTAGCTGAGACGCAGCTTAAGTGTATGGCAGAATCGTATAAGTCACTTGAAACACGAGCCCAGGAGTTGGAAACTGAGCTGAACCGTCTGCAAATTAAGATAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAAGGCTCATGCAGCTGCTTTGGCCAGGAGCAAGGATCTACAAGAGCAGTTACAAAGGATTGAGTACTTGGTAGCTGATGATGATCACAAGACTTCGCATGATAGAGATTTGACTGCTGCTGCTGAAAAGCTAGCCGAGTGTCAGGAAACCATACTTCTTCTGGGCAAGCAGTTAAATGCTCTACGTCCACAAACTGAGCCAATTGATTCACAGTCTAGTAAGATAAATACAAAGGATGAAGGCTTGACAGAAGATGATCCCACCACCAATAGCAAAAAATTTCAAGAATTAGGTCAGATGGATATGGACAATACTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCCCCCTTACATTTTTCCAACAGCTTATTTAGCCCTTCAGACAGCGAGTCCACCCTTCCAGCCAGATCCCCAGTACAGCATTCTAAATCAAAACCAAAACACAGGCCTACCAAGTCGGCCTCTTCTTCAGTTTCTTCTGCCACTACACCTGAGAAACATGCACGGGGATTTAGTAGATTCTTTTCACCAAAAGGAAAATCCGGTCATTGA 3285 0.414 MELIFEFAPQSFAMDRRWPWKKKSSEKAVIEKAATALDSSDASNNQDNKKKPNYIQISVESYSHLSSLEDQVKTYEEKVQTLEDEVKEINEKLSAANSEINTKESMVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIVNFEQELLRSAAENGALSRSLQEHSNMLIKFSEEKARAEAEIEILKGNIEACERENNSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHIEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKSPSPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTVSKLQILEAQSQARNQLKGSPKSIVQITHESLYNQNASSAPSFVSMSEDGNDDAVSCAESWSTAIVSGISQSPNEKCTEESRKSEVSKKLELMDDFLEVEKLARLSNESNVDATVSVSSNNKTTDTGTDNVSEVGTGKEGLAEKIGNSNSLPNQVSSDALMSVPDPQSDASGLLLTELRSRILLVFESLAKDADIGKIVEDIKHVLEDSHDTTISHSVNAHPSDAICDRKDNPEDAGLNLEKEIISSQQPKQYVHITSDLEVAISQIHDFVLFLGKEAMTFHDISCDGNEMRQKIEEFSVTFDNLLSNNASLQQFVLDLSYVLDKASEFRFNVLGYKGTEAETNSPDCIDKIALPENKLVQDNSPGERYQNGCSHILNTCSNPEVPDDGNLVSGYKVDDASQKLSMQEFEKLKLEKEKVVTDLSNCTETLEMTKSQLLETEQLLAEVKSQLASAQKSNSLAETQLKCMAESYKSLETRAQELETELNRLQIKIESLENELQDEKKAHAAALARSKDLQEQLQRIEYLVADDDHKTSHDRDLTAAAEKLAECQETILLLGKQLNALRPQTEPIDSQSSKINTKDEGLTEDDPTTNSKKFQELGQMDMDNTTSAFVQRLSSESPLHFSNSLFSPSDSESTLPARSPVQHSKSKPKHRPTKSASSSVSSATTPEKHARGFSRFFSPKGKSGH 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00298 1094 Coils Coil 835 925 - -
Spst9g00298 1094 Coils Coil 217 283 - -
Spst9g00298 1094 Pfam Filament-like plant protein, long coiled-coil 103 976 IPR008587 -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 519 538 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 1033 1050 - -
Spst9g00298 1094 Coils Coil 149 209 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 972 1010 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 1062 1077 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 1033 1094 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 519 540 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 341 355 - -
Spst9g00298 1094 Coils Coil 360 387 - -
Spst9g00298 1094 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 14 1089 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 335 355 - -
Spst9g00298 1094 MobiDBLite consensus disorder prediction 972 986 - -
Spst9g00298 1094 Coils Coil 65 106 - -
Spst9g00298 1094 SUPERFAMILY Tropomyosin 813 975 - -
Spst9g00298 1094 Coils Coil 802 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00298 Spst-Chr9 2818153 2822793 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00298 9 2818153 2822793 Spst9g00298 9 2818153 2822793 ECH
Spst8g01993 8 27240788 27245219 Spst9g00298 9 2818153 2822793 PCT