Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02327 ATGGCTTCAACTCAGCATCACGTCCAAGGCCTAACACCCGAGGAACAAACACAGCTGGAACCCATCATAAAAAAATACCACCTTTTCGAACAGGCTCCGAACAAATGTTTCTCCATAATCTCGTACCGCATCGACGCTCCGGCGAGCAGGGTGTGGGTGTTCGTGAGAAGCTTCGAGAACCTTCAGAAGTACAAGCACTTCATCAAAGGGTGCAACATGAGAGGTGATGGTGGCGTTGGAAGCATAAGGGAAGTAACCGTGGTTTCGGGTCTTCCCGCGTCAACAAGCACCGAGAGACTCGAGATTTTGGACGATGAGAAACACGTCCTTAGCTTTAGGGTTGTTGGTGGCGAGCACCGACTCAAAAACTATCGTTCCGTTACATCCGTGAACGAGTTCAACAAAGAGGGTAGGGTTTACTCCATCGTATTGGAATCGTATATCGTCGACATACCCGAAGGGAATACGGAGGAAGATACCAAGATGTTTGTCGACACCGTCGTGAAACTCAACCTTCAGAAACTTGGGGTCGTGGCCATGGCTTCATCGATGCATGGACAATAA 564 0.4911 MASTQHHVQGLTPEEQTQLEPIIKKYHLFEQAPNKCFSIISYRIDAPASRVWVFVRSFENLQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDEKHVLSFRVVGGEHRLKNYRSVTSVNEFNKEGRVYSIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSMHGQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02327 187 PANTHER - 40 176 - -
Spst8g02327 187 SUPERFAMILY Bet v1-like 39 176 - -
Spst8g02327 187 CDD PYR_PYL_RCAR_like 43 175 - -
Spst8g02327 187 Pfam Polyketide cyclase / dehydrase and lipid transport 43 175 IPR019587 -
Spst8g02327 187 Gene3D - 1 187 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02327 Spst-Chr8 34300106 34300669 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01955 4 60179261 60182222 Spst8g02327 8 34300106 34300669 ECH
Spst8g02327 8 34300106 34300669 Spst8g02327 8 34300106 34300669 ECH
Spst8g02327 8 34300106 34300669 Spst9g00598 9 5289341 5289901 PCT