Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02326 ATGATGATAAATGAGCATGGACCTATTTTCTTTAGGAGAGTAAGTCCAGATGAAGATGAATTTGAACGGCGGCCAAGCCACTCCGGAGATGGTTGCTTCATAAACCCTGATAGTATTGTTGATTCCAATTCATTTGTCACATTACAAGGAAAGACTACTGTAGGAGATGCCTCAAATCCCATTAACAACAATGCCATTCAAGAGCAGTTGGCTGGAGGAAGGCCAATTGCTTCTGCTGCTTCACTTGCTGATAGAATAGGCTTTCAAGAAAATCTTCAGAGTTCAGCAGTTTTGCCTCATTCAATGTGTTCATTGGAGGCATTGGGGCCATACATTTTCAATAATTGGCAAAATGCATCAAACCCTTTGGCTGCGACTTTTGGTGATCACGGCTACGATGAATTATCAGGTATTCATAAGTGGAATGTGAACAAGTTTCTGAAAGCTCCAGAGGCTAATGGGACTGAGATACTGGCTTATTCTTCCCTAGGAAACCTGGTTCAAAATGGATGGACATCATCAAATGTTGCAAACTTGGCCAATTTTGCCTATAATTCCTCTAATTGTAGTAATGAGCTATCACTTAGTCTTGCAAGATCTCCTCCAACTGCAGGTCAGTGCTCAGAGTTGAGCTGCTCCAACGCATCTTGTAGCATGAATGGAACAAGTTCAGGCTTGGAGCAACCTTCTTGCAGCAGTAAGGAGCTGTCTATGAGATTAGGTTCTAACAAACATGTCCAATTTTCACCAGCAATACTGGGGTCCAGATATCTTGCTGGGGTTCAAGAAATACTTGCTCAAATTGCAACATATTCATTTGAAAATGTAGGGCTGATAAATTACTCAGCTTCTGGTGTTAGAGCAGGAGGAAATAAATCAGCTTCAGCCTTTACACCAAAGGGAAGGGTTGCGAATAACCAAAATGCAAATTCCATGTATGGAGCACATGTAGAAGAATCTAATGCAGCTGACTCAAACAAATCCCAACTTCTCATGCTTCTACAGCTGGTGGACAATGGATATAGTCAGTGTTTGGATGAGGTTCATACTGTGGCATCTGCATTCCATGCTGCTACTGAGCTGGATCCTCACATGCACGCACATTTTGCACTTCAAACCATCTCTCTCTTGTACAAGGACTTGAGAGAGAGGATTAGCAATTGCATTCTTACCATGGGACCAGATTCGAACAGCTTGTGTTCAGAAGAGGAGAAGGAATGGTCTCTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTACAGCAGTTGAAAAGAAAAGATCAGTTGTGGAGACCCCAAAGGGGCTTGCCAGAAAGATCTGTCTCAGTTCTACGCGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTGGCTGTAAAAAGTGGGTTGACAAGAAGCCAGGTATCCAATTGGTTTATCAATGCACGTGTCCGGCTGTGGAAGCCTATGATTGAAGAAATGTATACTGAAATGAATAGAAGAAAAGCTTGTAGACATGAAGAAGGATTGGAGTGCACTCACAAAAGCAGGATAAGCATGAACAGTCAAATAAGTGTGCATAACGCTGTGCGTAGTCGGGTATTTTATGAGAAGATGCGGTTATCTTCACAAAGGCGAGGTTTCATATAA 1653 0.4217 MMINEHGPIFFRRVSPDEDEFERRPSHSGDGCFINPDSIVDSNSFVTLQGKTTVGDASNPINNNAIQEQLAGGRPIASAASLADRIGFQENLQSSAVLPHSMCSLEALGPYIFNNWQNASNPLAATFGDHGYDELSGIHKWNVNKFLKAPEANGTEILAYSSLGNLVQNGWTSSNVANLANFAYNSSNCSNELSLSLARSPPTAGQCSELSCSNASCSMNGTSSGLEQPSCSSKELSMRLGSNKHVQFSPAILGSRYLAGVQEILAQIATYSFENVGLINYSASGVRAGGNKSASAFTPKGRVANNQNANSMYGAHVEESNAADSNKSQLLMLLQLVDNGYSQCLDEVHTVASAFHAATELDPHMHAHFALQTISLLYKDLRERISNCILTMGPDSNSLCSEEEKEWSLETSFIQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYTEMNRRKACRHEEGLECTHKSRISMNSQISVHNAVRSRVFYEKMRLSSQRRGFI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02326 550 SUPERFAMILY Homeodomain-like 432 499 IPR009057 -
Spst8g02326 550 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 196 514 - -
Spst8g02326 550 ProSiteProfiles 'Homeobox' domain profile. 427 490 IPR001356 GO:0003677
Spst8g02326 550 Pfam Homeobox KN domain 447 486 IPR008422 GO:0003677|GO:0006355
Spst8g02326 550 SMART HOX_1 430 494 IPR001356 GO:0003677
Spst8g02326 550 Pfam Associated with HOX 252 386 IPR006563 -
Spst8g02326 550 Gene3D - 433 512 - -
Spst8g02326 550 CDD homeodomain 430 491 IPR001356 GO:0003677
Spst8g02326 550 SMART prehox3 246 387 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02326 Spst-Chr8 34252647 34255831 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Spst8g02326 POX 4.7e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02326 8 34252647 34255831 Spst8g02326 8 34252647 34255831 ECH
Spst8g02326 8 34252647 34255831 Spst9g00342 9 3203102 3203848 PCT
Spst8g02326 8 34252647 34255831 Spst9g00596 9 5282986 5285128 PCT
Spst9g00341 9 3202215 3203009 Spst8g02326 8 34252647 34255831 PCT