Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02317 ATGGCCTCCGACGGAGCGACTTCGGCGGCGACGGCGAGTCGGAGGAAGCCGTCGTGGAGAGAGAGAGAGAATAACCGAAGGAGAGAACGAAGGAGAAGAGCAATCGCGGCCAAAATATACTCTGGACTTCGAGCTCAGGGGAATTATAATTTGCCCAAGCACTGTGACAACAACGAAGTTCTTAAAGCGCTCTGTGCCGAAGCTGGTTGGTGCGTCGAAGAAGACGGCACTACCTATCGGAAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAGCTCCATGAGAAACATTCCCTTTTCCTCTTCACAGAACCCAAGTCCTTTCTCTTCGTCGTATCCCAGCCCAATTCCTTCATACCAAGTAAGTCCTTCTTCCTCTTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCATCCCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCAGTGACACCACCTCTTTCATCACCTACGTCAAGAAATCCAAAACCAATTCCTACGTGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTTTTTGCAGCTTCTGCTCCTGCCAGCCCCACGCACCGTCACCTTTACACCCCCGCCACTATTCCAGAATGCGATGAGTCTGATACTTCCACCTGTGAGTCTAACCAGTGGATGAAATTCCAAGCATTTGCTCCTTCTGCATCTATGTTGCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGGTTCCTAATGGTGTGCCTGATAACTCAATACAAGAGATGAGGACGAGTTCAGAAGATTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGATTTGGAACTAACGCTTGGAAGCGGGAAGGTACGGGGTTAG 939 0.4909 MASDGATSAATASRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNIPFSSSQNPSPFSSSYPSPIPSYQVSPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLYTPATIPECDESDTSTCESNQWMKFQAFAPSASMLPTSPTFNLVKPVVPNGVPDNSIQEMRTSSEDFGVQVKPWVGEKIHEVALDDLELTLGSGKVRG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02317 312 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 152 IPR008540 -
Spst8g02317 312 MobiDBLite consensus disorder prediction 94 117 - -
Spst8g02317 312 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 11 311 IPR033264 GO:0003700|GO:0006351|GO:0009742
Spst8g02317 312 MobiDBLite consensus disorder prediction 15 30 - -
Spst8g02317 312 MobiDBLite consensus disorder prediction 90 117 - -
Spst8g02317 312 MobiDBLite consensus disorder prediction 163 182 - -
Spst8g02317 312 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02317 Spst-Chr8 34134630 34136198 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Spst8g02317 BES1_N 1.3e-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02317 8 34134630 34136198 Spst8g02317 8 34134630 34136198 ECH
Spst8g02317 8 34134630 34136198 Spst9g00395 9 3495362 3497064 PCT