Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02310 ATGTTGATCAATCCAGGTTTGGTGATTGGCTTTACAGGGTCTCACTGGGAAAAGAGGCTTCTGATGAATGAGATCATGACTGGTTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACACTAGCTCTATTAGAAGACAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCAACTTGATTGGGGTCGGAACCAGGGTACTGAGTTTGTTACCTCCCCTTGCAGTCTATGGAAGGGGGCCTATCGGTGCAACACAACACAATTCTCAGGTTGTACGTATAACAGAGAGGCAGAGGGTTACTGCCCAATTCTAACCTACAGCGGAGACCTTCCTCAGTGGGCACGGTATTTTCCTCAAGCTAATAAAGAGCCAAGAGGGTATTTGGTTAGAAGTGGAAGGGAAGTGAGGGCCAAGGTCTCTAAAATGTCTTCTTGGTGTGCGCAAGGCAAGGAACTCTCTGAAGCTACTTATCTTTTGTACTCTATGCTCATTCTATCTATTGTAGGCTTGACGAGGAAGAATAAAAGTGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGATACTAGCAGTGCAAGGGCACCTGATAGCATGCTAGGTGAAATTCGAGGAAGTAACTCTAGGTGTATGGCCTCATCGTTAGTGCGAACAGGATTTGTACGGGGTTCTCTGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACACTTCCTTAGAGGTTGCTGTGGATGGTGTCTGGAAAGTGTGTCCACAGGCTGGTGGATCCATTCAGTTTCCTGGCTTTAATGGTCAATATTTATTGTGGTTGTGTCTGGGCAATGTCCCAGTGCATGTAATTTCAATGGAGATTGTGTTGATGGAAGGTGTCACTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAGACGTTCCTGTCCCAGCAATTGCACTGGCAATGGCATGTGCCTCACCAGTGGAATATGTGAATGTAAAACTGGCTATACTGGCATTGACTGTTCCACTGTGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTTCGCTGTTCTGACTATGCGGGATATACTTGCCAGAACAGCTCCATGCTCCTCTCCACTCTTTCAATTTGCAGAAATGTGCTGGGAAACGATGTTTCAGGGCAACATTGTGCACCCAGTGAATCTAGCATACTACAACAGCTAGAAGAAGTGGTTGTCATGCCCAATTACCATCGATTATTCCCTGGTGGTGCTAGGAAACTATTTAATATATTTGGCAGCACGTACTGTGATGAGGCAGCTAAAAGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGAGAAGGATGGAGACAACAGGCTACGAGTATGTCATTCTGCATGTCAGGCGTATAATCTAGCATGTGGAGCTTCACTGGACTGCAGTGACCAAACCCTTTTCAGCAGCGAGGGGGAGGGGGAGGGTCAGTGCACTGGCTCTGGTGAGATGAAATTGTCATGGTTTAATCGACTAAGAAATTTTTCTTTCAGAAATAGTTCCTCCAAAGTAATATCTGTAAGATATAAGCAGCTTTAG 1599 0.4503 MLINPGLVIGFTGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADQLDWGRNQGTEFVTSPCSLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKEPRGYLVRSGREVRAKVSKMSSWCAQGKELSEATYLLYSMLILSIVGLTRKNKSGQSSLADYCTYFVAYSDGSCTDTSSARAPDSMLGEIRGSNSRCMASSLVRTGFVRGSLTQGNGCYQHRCINTSLEVAVDGVWKVCPQAGGSIQFPGFNGQYLLWLCLGNVPVHVISMEIVLMEGVTAFLDFMVMIAVDVPVPAIALAMACASPVEYVNVKLAILALTVPLCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSTLSICRNVLGNDVSGQHCAPSESSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCEKDGDNRLRVCHSACQAYNLACGASLDCSDQTLFSSEGEGEGQCTGSGEMKLSWFNRLRNFSFRNSSSKVISVRYKQL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02310 532 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 12 492 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst8g02310 532 FunFam leishmanolysin-like isoform X2 192 283 - -
Spst8g02310 532 Gene3D Leishmanolysin domain 3 76 190 - -
Spst8g02310 532 FunFam leishmanolysin-like peptidase isoform X2 6 75 - -
Spst8g02310 532 Gene3D Leishmanolysin domain 4 192 278 - -
Spst8g02310 532 PRINTS Leishmanolysin (M8) metalloprotease family signature 38 67 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst8g02310 532 PRINTS Leishmanolysin (M8) metalloprotease family signature 8 36 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst8g02310 532 Gene3D Leishmanolysin , domain 2 7 75 - -
Spst8g02310 532 Pfam Leishmanolysin 11 122 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst8g02310 532 Pfam Leishmanolysin 171 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Spst8g02310 532 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 10 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02310 Spst-Chr8 34066243 34072383 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02310 8 34066243 34072383 Spst8g02310 8 34066243 34072383 ECH
Spst8g02310 8 34066243 34072383 Spst9g00403 9 3574628 3581052 PCT