Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02308 ATGGCCCTAACCTCTGCACTCTTTCACCTTCTCCCCTTTCTATTATTAGGTAACAGAGCATCTGCCACAGTCTTTTCTCTGGAGAATCATTGTAGTCACACAGTTTGGCCCGGGATACTTTCCGGCAACGGCGCCACCATTCTCGGCGACGGCGGCTTTCCCCTGCCGCCCGGATCGTCGGTCCACCTTTCCGCACCGTCCGGTTGGTCTGGCCGGTTCTGGGCCCGGACCGACTGCTCCTTTGACGACTCCGGCTCCGGAAAATGCTCCACCGGGGACTGTGCCGGAGGCCTGAAATGCACTGGCGGAGGAGTCCCGCCGGTGACGCTGGTGGAGTTCACGATCGGAACCTCTGGCAACGGCAACAAGGACTTCTACGACGTGAGTCTCGTGGACGGTTACAACGTGGGAATGGGAGTGCGGGCGACCGGCGGAACCGGTGACTGCCAGTACGCGGGGTGCGTGGCGGACCTGAACGGCGAGTGTCCCACGGAGCTTCAGGTGAAAGACGGAGGTGGCACGGTGGTGGCGTGCAAGAGTGCGTGCACCGCGTTTAACACGGCGGAGTTTTGTTGCACCGGCGAGCACGGGACGCCGCAAACATGTTTGCCGACACAGTATTCGGAGATTTTCAAGAGTGCGTGTCCAACAGCGTACAGTTACGCGTACGATGATGCTTCCAGCACTTGCACCTGTTCTGGATCTGATTATGTTATCACTTTCTGTTCCACGGGATCATCATCGTAA 747 0.5863 MALTSALFHLLPFLLLGNRASATVFSLENHCSHTVWPGILSGNGATILGDGGFPLPPGSSVHLSAPSGWSGRFWARTDCSFDDSGSGKCSTGDCAGGLKCTGGGVPPVTLVEFTIGTSGNGNKDFYDVSLVDGYNVGMGVRATGGTGDCQYAGCVADLNGECPTELQVKDGGGTVVACKSACTAFNTAEFCCTGEHGTPQTCLPTQYSEIFKSACPTAYSYAYDDASSTCTCSGSDYVITFCSTGSSS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02308 248 FunFam Thaumatin-like protein 1a 23 243 - -
Spst8g02308 248 Gene3D Thaumatin 23 242 IPR037176 -
Spst8g02308 248 PIRSF PR5 1 248 IPR001938 -
Spst8g02308 248 SMART tha2 25 243 IPR001938 -
Spst8g02308 248 Pfam Thaumatin family 29 242 IPR001938 -
Spst8g02308 248 CDD TLP-PA 24 242 - -
Spst8g02308 248 PRINTS Pathogenesis-related protein signature 85 114 IPR001938 -
Spst8g02308 248 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Spst8g02308 248 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Spst8g02308 248 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Spst8g02308 248 ProSiteProfiles Thaumatin family profile. 22 245 IPR001938 -
Spst8g02308 248 ProSitePatterns Thaumatin family signature. 85 100 IPR017949 -
Spst8g02308 248 PANTHER OS03G0233200 PROTEIN 14 242 IPR001938 -
Spst8g02308 248 SUPERFAMILY Osmotin, thaumatin-like protein 24 242 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02308 Spst-Chr8 34053734 34054987 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02308 8 34053734 34054987 Spst8g02308 8 34053734 34054987 ECH