Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02302 ATGACCCAAGAGAGGGATAAGGGTGCAAAAAGAAAATATGGAGTTATGCAAAGTTCAGATGGGCCAGAATTGCTGTTTTCTATGAAGTTGGATCCTGAAATCTATTCATCTTCAAACCCACGGAAAGAGCTACCCCAGGCTCCTTGCCTAACTGATGTGGAGCCAGACAGAATCAGTTACTTACCGGGTCATGTAATAGACCAAGTTTTGTCACATTTGTCAGTTAAGGAAGCAGTGAGAACAAGTGTGTTATCTAGCAAATGGAGGTACAGATGGGCCACGCTACCCAATCTTGTGTTCGATGACCAATGTATCTCTGTGGCTACTCAGGATCATATGATTATCAAGAACAAGCTTTTGAGAACTGTTGATCATGTTCTGCTCCTTCATTCCGGGCCAATCAACAAGTTCAAGCTCTCCCATCATGATCTCATTGGTGTGACTGATATTGATCGTTGGACGCTTCATGTATGCAGAAAGTCTATTAAAGAGTTTGTTTTGGAAATATGGAAAGGGCAGCGCTATAAGATACACTCATGTTTATTTTCTTGTCAAAGTTTGACTCATTTAGAATTATTCAATTGTTGGCTTAAACCTCCATCAACATTTAAAGGGTTTAAGAACTTGAAGAGTCTTGATCTTCAACATGTTACCATAGCTCTGGATGCTTTTGAAAAATTGATATCCAGCTGCCCAGTGCTTGAACGGTTAACTCTGATGAACTTTGATGGTTTCACTCATCTTAATATTGATGCACCGAATCTCCTGTTTTTTGACATTGGGGGTAGATTTAATGGAGGCTCTAGCAATTTGCTCAAATTTTTTGTTCATCTACCACACGTGCAAAGGCTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGCGGGGGTTGTGCCAATAAAGCTTCCAAGACCATGCATTGATCTAAGCTATCTTTCCATACGCATAAACTTCAACGATTTGAAGGAAATCTCAGCTGCTCTCTGCATCTTAAGAAGCTCCCCTAATCTACAAGAGCTAGAAATATTGGCTCGACCGGAGGAGCAGACTGTTCAGTTAACACACACCTATTGTTGGGAAGATGTCTATTTTGCTTGTCCAGACATGCATCTGCGATATGTAAAGATAGATGACATATCTGGTGTCAAACCTGAATTAGATTTCATCAACTTTCTACTTCTATACTCTCCTGTGTTAGAAAGGATGACTGTGAAGCCTGCTTCAAACATCGGAACAGAACTGATGAAAGAACTTTTGCGGTTTAGGAGAGTCTCAAGAAGAGCTGAAATTATTTACCTTGACTCTCCTTAG 1314 0.4026 MTQERDKGAKRKYGVMQSSDGPELLFSMKLDPEIYSSSNPRKELPQAPCLTDVEPDRISYLPGHVIDQVLSHLSVKEAVRTSVLSSKWRYRWATLPNLVFDDQCISVATQDHMIIKNKLLRTVDHVLLLHSGPINKFKLSHHDLIGVTDIDRWTLHVCRKSIKEFVLEIWKGQRYKIHSCLFSCQSLTHLELFNCWLKPPSTFKGFKNLKSLDLQHVTIALDAFEKLISSCPVLERLTLMNFDGFTHLNIDAPNLLFFDIGGRFNGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAAGVVPIKLPRPCIDLSYLSIRINFNDLKEISAALCILRSSPNLQELEILARPEEQTVQLTHTYCWEDVYFACPDMHLRYVKIDDISGVKPELDFINFLLLYSPVLERMTVKPASNIGTELMKELLRFRRVSRRAEIIYLDSP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02302 437 Pfam Leucine Rich Repeat 208 232 IPR013101 -
Spst8g02302 437 SUPERFAMILY RNI-like 159 343 - -
Spst8g02302 437 SUPERFAMILY F-box domain 55 100 IPR036047 GO:0005515
Spst8g02302 437 PANTHER F-BOX PROTEIN-LIKE 56 411 - -
Spst8g02302 437 SMART 9598neu4hmm 366 434 IPR006566 -
Spst8g02302 437 Pfam FBD 367 405 IPR006566 -
Spst8g02302 437 ProSiteProfiles F-box domain profile. 55 89 IPR001810 GO:0005515
Spst8g02302 437 Gene3D Ribonuclease Inhibitor 130 435 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02302 Spst-Chr8 33934016 33940109 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02302 8 33934016 33940109 Spst8g02302 8 33934016 33940109 ECH