Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02301 ATGCCAATGGACACTCCCTTGCTAGAGAACAGTGGGAACTCTGTTAATGGTGAGGAGGAGAAGGCAGTGCAATGGGCTGTTAAGAGTTTTGGGGTTGAGTCAAAGAAGCTGTGGAGACTAGCAGGCCCTGCTATCCTCACCTCTCTATGTCAGTACTCGCTTGGTGCACTCACTCAAACTTTTATAGGCCAAATTGATGACCTTGCTCTTGCTGCATTTTCTGTCGAAAACTCTGTTATTGCTGGTCTTGCCTTTGGAGTCATGTTGGGGATGGGGAGTGCTTTGGAGACTCTGTGTGGGCAAGCGTATGGAGCGGGGCAGATGAGGATGTTAGGGGTGTACATGCAGAGATCATGGGTCATCTTGTTCACCACTGCACTTCTTATGTTACCTTTTTATGTTTGGTCTCCCCCAATTTTGAAGCTGTTTGGAGAAACATCTCAGATCTCAAATGCTGCAGGAAAATTTGCTCTGTGGATGATACCTCAGTTGTTTGCATATGCCATGAACTTTCCAATCCAGAAGTTCTTGCAGGCACAGGGGAAAGTCCTGGTGATGTTATGGGTATCAGTAGGTGTTTTGGTGCTGCACACAATTTTTAGTTGGTTTCTTATTCTGAAACTGGGGTGGGGTCTAAGTGGAGCAGCAATTACTCTCAACACATCTTGGTGGTTGATTGTGATTGCACAATTACTGTACATTTTCATCACAAAGTCAGACGGAGCATGGAGTGGATTCACATGGCTAGCATTTATGGACTTGTTTGGTTTTGTAAAGCTTTCTCTGGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTATTTAATGATACTGGTGGTGATGACAGGGCGCTTAGAAAATCCTCTGATACCTGTTGATGCCATATCTATATGTATGAACATTAATGGCTGGGATGCCATGATTGCAATTGGGTTCAATGCCGCTATAAGTGTGAGAGTATCAAATGAACTTGGTGCTGGTGATTTCAAGGCTGCAAGATTTTCAGTGTGGGTGGTTTCCATCACATCAGTGGCCATAGGTGTTGTGGTCATGATCGTAGTGCTATCAACAAGGGATTTCTTTCCCTACTTGTTTACCTCCAGCACTGCAGTTGCTAATGAAACAACTAGGCTTGCTGCATTGCTTGGTGTCACTGTCATTCTAAACAGCCTTCAACCAGTCCTATCCGGTGTTGCTGTTGGAGCTGGTTGGCAATCTCTAGTAGCATACATCAACATTGGGTGCTACTATGTATTTGGATTGCCGGCAGGGATAATCTTGGGATTTCTACTTCATTTTGGAGTAGAGGGTATTTGGTCAGGGATGATTGCAGGCATAGTTTTGCAGACCGCAATCCTTATAATCGTCACTTCAATAACCAACTGGAAAAAAGAGGCTGAAGAAGCAGAAAGTCGTGTGAGAAAGTGGGGAGGATCAATTGCACAAGATCAGTGA 1455 0.4447 MPMDTPLLENSGNSVNGEEEKAVQWAVKSFGVESKKLWRLAGPAILTSLCQYSLGALTQTFIGQIDDLALAAFSVENSVIAGLAFGVMLGMGSALETLCGQAYGAGQMRMLGVYMQRSWVILFTTALLMLPFYVWSPPILKLFGETSQISNAAGKFALWMIPQLFAYAMNFPIQKFLQAQGKVLVMLWVSVGVLVLHTIFSWFLILKLGWGLSGAAITLNTSWWLIVIAQLLYIFITKSDGAWSGFTWLAFMDLFGFVKLSLASAVMLCLEFWYLMILVVMTGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFKAARFSVWVVSITSVAIGVVVMIVVLSTRDFFPYLFTSSTAVANETTRLAALLGVTVILNSLQPVLSGVAVGAGWQSLVAYINIGCYYVFGLPAGIILGFLLHFGVEGIWSGMIAGIVLQTAILIIVTSITNWKKEAEEAESRVRKWGGSIAQDQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02301 484 NCBIfam MATE family efflux transporter 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst8g02301 484 Pfam MatE 43 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst8g02301 484 Pfam MatE 264 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst8g02301 484 CDD MATE_eukaryotic 33 468 IPR045069 GO:0042910|GO:1990961
Spst8g02301 484 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02301 Spst-Chr8 33916562 33919489 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02301 8 33916562 33919489 Spst8g02301 8 33916562 33919489 ECH