Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02216 ATGGACCCGTCTATCATGAAGCTTCTAGAAGATGACGAGGATGAAACTATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCTCTAAATAGAGATATAGGAGGAGATGTGTCTGCTTCTCAGTTTTCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAACACATCAAGTCAATCTATATCACAGTGGCCTACTTCTAACCATGACAACCAAACCGACTGTCAAAATCAAGAACCTAAAACTGCACAACAAGAGCAACATTCATCTGAGATGGAGCTGAAGCAACATGGATCACTTGGTGAACACCTACAGCATGTTGCTTCTCAGGACGTAAATAATTCTCATTCATCCCAGAAACAATCTCAAGATGAATGTCACCAAGCACCAGCTGTACAAGTTCCCCTCCATAATTCTCAACCTATCGGAATTCAGAATTCTGGAAAGGTACCAGTCCTTAATAATGAAGTAGTAAAGAGTCATAACCCCAGCAGTGAATCCCAGTATGCAAAGTTGCAGCAGATGAGTAATCAGCAGGCTACAGTCTCTGAGCAGCCAAGTAGCCAAGGAAATCGTAGTAAACAAGTACCATTTGGCCTGTTGCTACCCATCTTACTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACGTTATTTGCTAAATTGAAGAAAGATGAAATACCGAAAGACAGCTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTAGCAGAAGTACAAATGCAACCACAGGCAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCTCCCTCTAAGGATGTCAACTGTTAGTTCAGGTGCAAGGCAATTGAATGATCCCCATGCTTTAGCACAGATGCATCAAAGAAGTATGAATGTTGCTGTTGACCAATCTCGCATGAGTTCTTCAGCTGGTCAAACTACAGAGAGCAATGCTAGAAAGCCTCAGGAATTCGATGTTAAAATAGAATCTCAAGGATTGCAATCAAATCAGTTGACATCTTCCAGTTCCAACACAGTTGGTCAAGAAGCAGAAAGAACATCAGTTCATATACAAGGGCTTAATAAACAGCGGCAACACCATCTACATTTTGCATCCGCATATGGAAACAGTGGTGGTAACTATAACCCTTTTTCTGGGACAACAAGTAGTTCCACATCATCTATCAAACAGCAAACGCATGAATCACATAATCAAATTCCTCATCAAAACATTGGTTCAAATCATTTAGGTGGGTCAGCACATGGTTTGAGTTTAATTGGTGTGCCAAAACTTGAACAGCAGAATTCTTTCAATGATCCCAAAAGACTGCCAGGTGGATCTGTTTCTCCTGCTGTAAACAATACAGCATCTCAGCAAACGTCAAATGCTTGGCAACCATCTACAAACAAAGAACAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAAAAGGAACCTACTGACTTGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGCTACTCAAGGAACTCTAAAAGATGAATTTTCGAGAGGTCTTCCAGCATCCACAAGCATGCCACCTACAACATCTACTGGCTTGCTAGCACATGGTTCTGCTTCCTCTTCTGTAATCACCCACCTAGACTCCAGTGTCTCGATCCAATCAAATGCTTCTGGAATTGTTGCAAGGACACCTCTTAAAAAGTCTGCTGTTACCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTCCTAGTAAAAAACAAAAAACTTCTGGGGGATACGTGGAACAAAGCATTGAACAACTTAATGATGTTACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAACAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCTTCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCTATTGCAAAAAAAATTAATTGACATCATGTCCAAGTGTGGCTTGAAGGGTATGGGCAATGATGTGGAGAAATGCTTGTCACTGAGTGTGGAGGAAAGGATGCGTGGACTGATAAGTAACCTGATTAGAATATCAAAGCAGAGGGTTGATTTTGAGAAAACAAGACATCGGACTGTTGTCACTTCTGATGTTCGGCAGCAAATCATGACAATAAATAGAAAAGTAAGGGAAGAGTGGGAGAAAAAACAGGCAGAAGCAGAGAAGCTTCGGAGACTAAATGATGTTGACAGCAATACTGGTGTTGATGGTGACAAGGAGAGGGATGATGGCCGTGCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGAGTGGACGGGTCATCTGGTTCTCAACCAGCTAAAGATGTGAATCGCAAATCTTCATCAACATCTGAAAGAAGTACAAAGGAAAACCAAGAAGGGGAGAAAAGAGGTTCAACCCCTTTTATAGCAAGTTCAGTGGCCAGAAAACTTGGAAAGAGTCATGCCATGGCCCCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATAGCAGTCCTGGAGAGGGAGCCCCAGATGTCTAAATCTCCACTCATACATCGTTTGTACGAGAAAATTCACTCTGATGCCCCAGTTGAACAAGCGTTCTGTGATATTTCCACTAGAAAGATCCAAAAGGAGAAAATTGTCATGGAGCTTCTAACCGTCGTGGATGATTTTTTTGTCACGGCGTCTCTGGCGCTTCTTCTCAGTTTCATCGTCTTCAAGCTCGTCGAGGCCATCAACGACACTCACGCCACTCCAAAACATCACGTCGGTCCCGAATCGGTTCCTCCGGTTTCTCATGCGGAACGCTTCATGGTTCAGCCCGCTCAAAGCAAGAGCAAGGTCGGTTTTATAAGTCCGGTTCACGCTGTATCCGACAAGATAGAAAAGGCCACGGTCGAACCGGTTCCTCGTGGGAAACTGTTGACGGTTCAGCCGGCTCAGTGTAAGAGTGTAGATATCGAATGTGAAGGGCCTGCGGTCGAACCGGTTCGACCGGCTCATCCAGCTGAGATCAAGGACAATATCTGTTTTATTAGTCCGGTTCAAGGTGCCACGTGTGCAGTTATTGAACACATAGAAGAGGCTATGGTCGAACCGGTTCCTTCAACTGACAGCAGGATTTTAAGTGCGGTTCAAGCTGCCACGTGTGTAGGAAGCGAACACAAGATAGAAGAGGCTATGGTGGAATCCGATTCCAACGTTATTCTCCAGTCTCCGGTGAAATCACGCACAGACATTGCCGTTAAAGAGGAAATCGCTGAGGCCAATGACGAAACAACACAAGAGCTTGATGGGAAGAGGGAAGTGGAAATTCTTGAAGATCCTTTTTGCACTGAAATTGAAGTTTCTGTTGTAGAAAACGGCGTAAAAGAGAATGATTACAATGGCGATGATGATTGGGAAGGGATTAATTGGAGCGAGTTGGAGAAAGAGTTTATGGCGGCTACGGAATTTGTTACTAACGAGGGTGGTCGATTGGAGAGTGTTGGAAGCAACGTGAAAATGGAGTTGTATGGGCTTCACAAGGTTGCGACTGAAGGGCCTTGCCGTGAACCTCAGCCAATGCCTCTCAAGCTCTCCGCACGTGCCAAGTGGAATGCTTGGCAAAAGATGGGGAACATGAATCCAGAGGTCGCAATGGAGCAGTATATAAGCCTTCTTTCGGATAAATTTCCTGAATGGATGAAAGATACTACAACTGGAATGAGTGAACATGAACCCACAAAGGCTGAAGTTTCTGAGTCTGCTGCTTCTGATTTGATCACAACTTTGTCTTATCAACAAAGGATCTTTAGTGATAGTGAACTTGAACAATCTTCTGATTCGAAGAAGCGTAGCCCTCTTTCAGAGTCAGATTTAAAGAACAATGAGACTGTTTTCACATGGACTAAGGTAAGAAAGTGGTGGCGAAGGAGCCTCATGTGGAAGGTCGGGGAGAATGAGGTGGAGAAGGCAGCTTGA 4158 0.4432 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSASQFSGSDAVLSQGSNNTSSQSISQWPTSNHDNQTDCQNQEPKTAQQEQHSSEMELKQHGSLGEHLQHVASQDVNNSHSSQKQSQDECHQAPAVQVPLHNSQPIGIQNSGKVPVLNNEVVKSHNPSSESQYAKLQQMSNQQATVSEQPSSQGNRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDSFVRLMKGIVGDQMLRLALAEVQMQPQARPNQASAGQQLPLRMSTVSSGARQLNDPHALAQMHQRSMNVAVDQSRMSSSAGQTTESNARKPQEFDVKIESQGLQSNQLTSSSSNTVGQEAERTSVHIQGLNKQRQHHLHFASAYGNSGGNYNPFSGTTSSSTSSIKQQTHESHNQIPHQNIGSNHLGGSAHGLSLIGVPKLEQQNSFNDPKRLPGGSVSPAVNNTASQQTSNAWQPSTNKEQNLGLMSSVSYVKKEPTDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGATQGTLKDEFSRGLPASTSMPPTTSTGLLAHGSASSSVITHLDSSVSIQSNASGIVARTPLKKSAVTQKKPLEALGSSPPPPSKKQKTSGGYVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKALLQKKLIDIMSKCGLKGMGNDVEKCLSLSVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWEKKQAEAEKLRRLNDVDSNTGVDGDKERDDGRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDGSSGSQPAKDVNRKSSSTSERSTKENQEGEKRGSTPFIASSVARKLGKSHAMAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSDAPVEQAFCDISTRKIQKEKIVMELLTVVDDFFVTASLALLLSFIVFKLVEAINDTHATPKHHVGPESVPPVSHAERFMVQPAQSKSKVGFISPVHAVSDKIEKATVEPVPRGKLLTVQPAQCKSVDIECEGPAVEPVRPAHPAEIKDNICFISPVQGATCAVIEHIEEAMVEPVPSTDSRILSAVQAATCVGSEHKIEEAMVESDSNVILQSPVKSRTDIAVKEEIAEANDETTQELDGKREVEILEDPFCTEIEVSVVENGVKENDYNGDDDWEGINWSELEKEFMAATEFVTNEGGRLESVGSNVKMELYGLHKVATEGPCREPQPMPLKLSARAKWNAWQKMGNMNPEVAMEQYISLLSDKFPEWMKDTTTGMSEHEPTKAEVSESAASDLITTLSYQQRIFSDSELEQSSDSKKRSPLSESDLKNNETVFTWTKVRKWWRRSLMWKVGENEVEKAA 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02216 1385 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 6 923 IPR045144 GO:0005669|GO:0006352
Spst8g02216 1385 MobiDBLite consensus disorder prediction 160 195 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 582 614 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 846 863 - -
Spst8g02216 1385 Pfam Acyl CoA binding protein 1208 1286 IPR000582 GO:0000062
Spst8g02216 1385 Pfam Transcription initiation factor TFIID component TAF4 family 621 917 IPR007900 GO:0005669|GO:0006352
Spst8g02216 1385 MobiDBLite consensus disorder prediction 437 476 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 110 129 - -
Spst8g02216 1385 Coils Coil 654 674 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 515 550 - -
Spst8g02216 1385 ProSiteProfiles RST domain profile. 190 261 IPR022003 -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 759 797 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 331 355 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 37 86 - -
Spst8g02216 1385 Coils Coil 741 761 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 304 355 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 384 420 - -
Spst8g02216 1385 CDD TAF4 616 917 IPR007900 GO:0005669|GO:0006352
Spst8g02216 1385 Gene3D Histone, subunit A 666 711 IPR009072 GO:0046982
Spst8g02216 1385 MobiDBLite consensus disorder prediction 36 100 - -
Spst8g02216 1385 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 1207 1295 IPR000582 GO:0000062
Spst8g02216 1385 SUPERFAMILY Acyl-CoA binding protein 1206 1294 IPR035984 GO:0000062
Spst8g02216 1385 Pfam RCD1-SRO-TAF4 (RST) plant domain 193 256 IPR022003 -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 304 322 - -
Spst8g02216 1385 Gene3D - 1202 1310 IPR014352 -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 821 870 - -
Spst8g02216 1385 MobiDBLite consensus disorder prediction 384 421 - -
Spst8g02216 1385 FunFam Transcription initiation factor TFIID subunit 4B 664 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02216 Spst-Chr8 32013048 32031191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02216 1196 1307 Acyl Lipid Metabolism Gene Families AT4G24230 57.895 7.69e-36 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02216 8 32013048 32031191 Spst8g02216 8 32013048 32031191 ECH