Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02214 ATGGCGTCGAGTTTTGACCGGTGGGAAAATGATCCTTTCTTTAACGCCGCCGAAGAAGTTCAAGATTCTGCAGACAGGATGGAATCTACGTATAGAATATGGATACACGCAACAAAAGATGCGTCCAGCATGTGGAACTCTGATGAATTGTGTAGAGACTTACGTACTGCACTTGGCACTGCCAAATGGCAGTTAGAGGAATTTGAGCGGGCAGTGAAGTCAAGTTATGGCAAAGTCTCAAGTGATGAAGCGAGAAGTAGGCACCGAGATTTTATCACTGCCATTGAGGATAAGATAATGAAAGTTGAGCATTCGATGAGTGAATCGGTAGGCAAGGCGTCTCTGCCTTGGTTACGTTTAGACGAAGGAGAACAGAATGAGCTTGCTTTGTTTCTTTCGGGAATACCAGTAATTAACAGCAGGGACATTGAAGATCCACGATTAAGTGATAACGTTTCACCGAGTCATTGTTTGGAGGATTTTCATGTTTCATCTGGATGGGGTGAATCAAAGGAGGAGCTACCACATGGGCATCGCAGGGCAGCCAGTGCTAGTGCTGATATTGGATTTTGGAAAATTTCAGTTCATGATGATGCACAGCAGTGGAGTTCCTCTAGTTGTTCTTCTGGTCCAATGCATAAGGCACCTAGTTTATCAGGATTTATTAGTTCCATGGAATCAGTCTCTAAGATGAAGTGGCCTAGGAATGGTTATAGAAAGCTAAAAGGAGTGGATCATCATAGAGAAACTGATAGTACACTACTTCCAACAACTGAATCCAATAGGGGCAACAATGCACGCTGTGAAAGAAGTAAGAGTGACCTTGATAGTTGTGATGAATGCTATGACAAGCAACTCTATGGATGGTGTGGTGCTATTCGGAGACGGCTTCAAAGATCTCAATACCAAATAAAATACAGTCAGCCTGTTCGAATAGCTGTTTGGATTTCTTTTCTTCTTTGTTTTATTGCTTTAATTGCATTCCACGCAATGTAG 996 0.4257 MASSFDRWENDPFFNAAEEVQDSADRMESTYRIWIHATKDASSMWNSDELCRDLRTALGTAKWQLEEFERAVKSSYGKVSSDEARSRHRDFITAIEDKIMKVEHSMSESVGKASLPWLRLDEGEQNELALFLSGIPVINSRDIEDPRLSDNVSPSHCLEDFHVSSGWGESKEELPHGHRRAASASADIGFWKISVHDDAQQWSSSSCSSGPMHKAPSLSGFISSMESVSKMKWPRNGYRKLKGVDHHRETDSTLLPTTESNRGNNARCERSKSDLDSCDECYDKQLYGWCGAIRRRLQRSQYQIKYSQPVRIAVWISFLLCFIALIAFHAM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02214 331 Gene3D - 9 110 - -
Spst8g02214 331 CDD SNARE_NTD_STX6-like 11 106 - -
Spst8g02214 331 FunFam Syntaxin 10 8 109 - -
Spst8g02214 331 SUPERFAMILY t-snare proteins 11 108 IPR010989 GO:0016020|GO:0016192
Spst8g02214 331 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Spst8g02214 331 PANTHER OS05G0443700 PROTEIN 1 322 - -
Spst8g02214 331 MobiDBLite consensus disorder prediction 250 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02214 Spst-Chr8 31987774 31990299 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02214 8 31987774 31990299 Spst8g02214 8 31987774 31990299 ECH
Spst8g02214 8 31987774 31990299 Spst9g00518 9 4597789 4600804 PCT