Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02210 ATGGCAACAGCCTCAGAGAACAACACCAACGCCACGCGCCCCCAGCGCCAGGCCAAGAAGAGAGCGGCGGCAGCCATATGTGAACTGCTCGGAAACGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACCAATGTCTCAAACGACGTTGCCGTTTCGGAGATTCAGAAACGGAAAAAAGTTAAACTCAAGAAAATCGATGAAAGAAGCGACCCTCGACTCTGTGGGCCCTACGTTTCTGATATATACGAGTACCTTCGCGCAATGGAGGTCCTACCAGGGTTTCTTTTTCTGGCTCAGGTTGTTCCTAGTATGCGACCGTTGCCAGATTATGTTCAGAGGGTTCAGAACGATGTGGATGGTAACATGCGCGGTGTTCTGGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATGAACTGGTTTCGGAAACGTTATACCTTTGTGTGGCTTATATAGATAGGTTTTTATCTTTGAATGTATTGTGCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTCATCGCTTCGAAATATGAAGATATTAAGCCACCTCAGGTGCAGGACTTGTGCTACATTACGGATCATACATACTCTAAGGAAGAGATTGTGAATATGGAAGGCGATATATTGATGGCTTTGAAGTTTGAATTGGGTGCCCCTACAGTGAAAACATTCTTGAGGAGATTTTGTAGAGTTGGTCAAGAGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCGGAGCTAAGTTTGTTGGATTATTATTGTGTAAAGTTCTTGCCATCTTTGGTGGCCGCATCTGTTATATTCTTAGCAAGATTTATGTTAAGCACAAAGACACATCCTTGGAATTCGTCTCTCCACCAACTCACTAGATATAAACCTGTTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTATCTCAGAAGGAGGGGGCCTTCTTTGCAAGCTGTGAGAGATAAATACAAACAGCATAAGTCTATGTTAGTAGCACGCTATAGCAGTGGGGTTGGTGGAACAGGGTAA 1053 0.4482 MATASENNTNATRPQRQAKKRAAAAICELLGNAKKKRVVLGDLTNVSNDVAVSEIQKRKKVKLKKIDERSDPRLCGPYVSDIYEYLRAMEVLPGFLFLAQVVPSMRPLPDYVQRVQNDVDGNMRGVLVDWLVEVAEEYELVSETLYLCVAYIDRFLSLNVLCRQRLQLLGVAAMLIASKYEDIKPPQVQDLCYITDHTYSKEEIVNMEGDILMALKFELGAPTVKTFLRRFCRVGQEGVDTSDLQFEFLSCYLAELSLLDYYCVKFLPSLVAASVIFLARFMLSTKTHPWNSSLHQLTRYKPVDLKECILNIHDLYLRRRGPSLQAVRDKYKQHKSMLVARYSSGVGGTG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02210 350 SUPERFAMILY Cyclin-like 70 219 IPR036915 -
Spst8g02210 350 FunFam G2/mitotic-specific cyclin 107 219 - -
Spst8g02210 350 CDD CYCLIN_AtCycA-like_rpt2 222 335 - -
Spst8g02210 350 Gene3D - 107 220 - -
Spst8g02210 350 PIRSF Cyclin_A_B_D_E 1 346 IPR046965 GO:0016538|GO:0044772
Spst8g02210 350 SMART cyclin_7 226 314 IPR013763 -
Spst8g02210 350 SMART cyclin_7 129 213 IPR013763 -
Spst8g02210 350 FunFam Cyclin superfamily protein, putative 220 291 - -
Spst8g02210 350 Pfam Cyclin, C-terminal domain 222 341 IPR004367 -
Spst8g02210 350 ProSitePatterns Cyclins signature. 124 155 IPR006671 -
Spst8g02210 350 Pfam Cyclin, N-terminal domain 104 219 IPR006671 -
Spst8g02210 350 SUPERFAMILY Cyclin-like 222 342 IPR036915 -
Spst8g02210 350 PANTHER CYCLINS 49 333 IPR039361 -
Spst8g02210 350 SMART Cyclin_C_2 222 345 IPR004367 -
Spst8g02210 350 Gene3D - 103 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02210 Spst-Chr8 31899110 31902873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02210 8 340 Core Cell Cycle Gene Families AT1G47230 54.775 3.21e-132 380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02210 8 31899110 31902873 Spst9g00507 9 4517716 4519403 PCT