Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02209 ATGGCAACAGCCTCAGAGAACCACATGACTAACCCCACGCGCCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCCATATGCCAACTTCACGGAAACTCCAAGAAGAAACGCGTAGTTTTGGGAGACCTCACTAATGTCTCAAATGCGGTTGCCGTTTCGGAGATTCAGAAACGGAAAAGAATCAAACTCGATAAACCGGCTGCTTCAGTTGCCACACCGGAGAAAGTGGATGAGAGAAGCGACCCGCAACTTTGTGGACCCTATGTTTCGGATATATACGAGTACCTTCGCGGAATGGAGGTTGTTCCCAGTAAGAGACCGTCACCGGATTATGTTCAGAAGGTTCAGAAGGATGTGAATGCTAACATGCGCGGGGTTCTGGTGGATTGGTTGGTTGAGGTTGCCGAAGAGTATAAACTGGTTTCCGACACGTTGTACTTTTGTGTGGCTTATATAGATAGGTTTTTGTCCTTGAATGTATTGTCCAGGCAGAAATTGCAATTGCTTGGGGTTGCTTCTATGCTTATAGCTTCGAAGTATGAGGAGATTAAGCCACCTGAGGTGGAGGATTTTTGTTACATCACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATGTATTGAAGGCTTTGAAGTTTGAATTGGGTGGTCCTACAGTGAAGACATTCTTGAGGAGATTTTGTAGAGTTGGTCAAGAGGGCATTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGTTGCTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAATTCTTGCCATCTTTGGTGGCAGCATCTGTAGTATTCTTAGCAAGATTTATGTTAAGCACAAAGACACATCCTTGGAATTTGGCACTCTATCAACTCACTAGATATAGACCTGCTGACTTGAAGGAATGTGTGCTAAACATACATGATTTATACCTCAGTAGAAGGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACAGCGTCTCCTCCCGAGATTCCCCTTTCTTTTTTTGAATTTTCAGTTGCAGATTTTGCGCGCTATAGCAGCAGTGGGGTTGGTGGGTGGAACCGAGGCTCCTCTTTGGAGGTGGTTGTGTTCTAG 1152 0.4505 MATASENHMTNPTRPQREAKKRAAAAICQLHGNSKKKRVVLGDLTNVSNAVAVSEIQKRKRIKLDKPAASVATPEKVDERSDPQLCGPYVSDIYEYLRGMEVVPSKRPSPDYVQKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSLNVLSRQKLQLLGVASMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADVLKALKFELGGPTVKTFLRRFCRVGQEGIDTSDLQFEFLSCYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSTKTHPWNLALYQLTRYRPADLKECVLNIHDLYLSRRGPSLQAVREKYKQHKFKCVATTASPPEIPLSFFEFSVADFARYSSSGVGGWNRGSSLEVVVF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02209 383 MobiDBLite consensus disorder prediction 1 22 - -
Spst8g02209 383 SMART Cyclin_C_2 223 346 IPR004367 -
Spst8g02209 383 SUPERFAMILY Cyclin-like 81 220 IPR036915 -
Spst8g02209 383 FunFam Cyclin A1 210 342 - -
Spst8g02209 383 PIRSF Cyclin_A_B_D_E 1 352 IPR046965 GO:0016538|GO:0044772
Spst8g02209 383 Gene3D - 108 221 - -
Spst8g02209 383 FunFam Mitotic cyclin 6 108 208 - -
Spst8g02209 383 Gene3D - 92 342 - -
Spst8g02209 383 Pfam Cyclin, N-terminal domain 92 220 IPR006671 -
Spst8g02209 383 CDD CYCLIN_AtCycA_like_rpt1 82 219 - -
Spst8g02209 383 SMART cyclin_7 130 214 IPR013763 -
Spst8g02209 383 SMART cyclin_7 227 315 IPR013763 -
Spst8g02209 383 ProSitePatterns Cyclins signature. 125 156 IPR006671 -
Spst8g02209 383 PANTHER CYCLINS 57 340 IPR039361 -
Spst8g02209 383 SUPERFAMILY Cyclin-like 223 347 IPR036915 -
Spst8g02209 383 CDD CYCLIN_AtCycA-like_rpt2 223 337 - -
Spst8g02209 383 Pfam Cyclin, C-terminal domain 223 345 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02209 Spst-Chr8 31883194 31886755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02209 5 355 Core Cell Cycle Gene Families AT1G47230 59.511 1.52e-149 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02209 8 31883194 31886755 Spst8g02209 8 31883194 31886755 ECH
Spst8g02209 8 31883194 31886755 Spst9g00504 9 4507650 4509606 PCT