Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02196 ATGTGGGTTATGGTCGGTGTGGGCGGTGGGTTAGGGGAGGTTTCTAGGGACATTTTTGTGCTGGCGGGACAGAGTAACATGGCCGGACGAGGTGGCGTGGTTGGGGGGAAATGGGACGGAAAAGTGCCGGCGGAGTGCGGGCCAAGCCCATGGGTTTGGCGGCTGAGTGCGGGGCTGGAGTGGGAGGAGGCCCGTGAGCCTCTGCATGCGGACATCGATGTGAAGAAGACGTGTGGGGTTGGGCCCGGGATGGCGTTTGCGAACGAGGTTTTGAGAAGTCGGGGCGGTGGTAATGGGCTTGTGGGCCTGGTGCCTTGTGCGGTGGGTGGGACGACGATTGGAGAGTGGAGTCGCGGGTCGCGGTTGTACGAAGAGTTGGTGCGACGTGTGAAGCATGCGATGCGTGGTGGCATGATCCGCGGCGTGCTTTGGTATCAAGGAGAGAGTGACACGGTGAGAGAGAAAGATGCGGATGGATATAAGGATAAGATGGAGAGGTTTATTATGGACCTTCGATTCGATCTTCACCTTCCCTCTCTCCTCTTTATCCAGGTAGCAGTTGCATCAGGGGAAGGAAAGTTGATAGAGAAGGTGAGGCATGGTCAAATGGGAATGACAATGGGAAATGTGAAGTGTGTGGATGCAAAGGGACTGCCTCTAAAGGCAGATAAACTTCACCTTACCACCATGGCTCAAGTTCATTTGGGCATTAGGTTGGCACAAGCCTATCTTCATTCCACCACCCACCATTACCAATTTAATACCAACATTAATCATACACAATTTTAG 789 0.5387 MWVMVGVGGGLGEVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAGLEWEEAREPLHADIDVKKTCGVGPGMAFANEVLRSRGGGNGLVGLVPCAVGGTTIGEWSRGSRLYEELVRRVKHAMRGGMIRGVLWYQGESDTVREKDADGYKDKMERFIMDLRFDLHLPSLLFIQVAVASGEGKLIEKVRHGQMGMTMGNVKCVDAKGLPLKADKLHLTTMAQVHLGIRLAQAYLHSTTHHYQFNTNINHTQF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02196 262 SUPERFAMILY SGNH hydrolase 17 248 - -
Spst8g02196 262 Gene3D SGNH hydrolase 15 247 IPR036514 -
Spst8g02196 262 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 16 244 IPR005181 -
Spst8g02196 262 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 16 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02196 Spst-Chr8 31710531 31712694 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02196 8 31710531 31712694 Spst8g02196 8 31710531 31712694 ECH
Spst8g02196 8 31710531 31712694 Spst9g00494 9 4438184 4440499 PCT