Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02195 ATGGAACTTCTAGGTTTTGGCAGTCTCAGAAATCCAGAGAAAGAAAGTCAGGGCAGTAGAGCAGAGGGAGAGAAAATGGGAGGGTGGGCTATCGCGGTGCATGGTGGCGCTGGTGTGGACCCTAATCTCCCACTCGAGCGCCAAGAAGAAGCCAAACAACTTCTCACGCGCTGTCTTAATCTCGGAATCTCTGCTCTTCGTTCCAATCTTCCCGCCATTGATGTTGTCGAACTTGTGGTGAGGGAGTTGGAAACGGACCCGCTGTTCAATTCTGGCCGTGGATCTGCCCTGACGGAAAAGGGAACGGTGGAGATGGAAGCTAGCATAATGGATGGCCCCAAACGGCGATGCGGCGCCGTTTCGGGTCTCACCACCGTTAAGAACCCCGTGTCTCTGGCTCGTTTAGTTATGGAGAAATCACCACACTCATACATCGGATTCTCCGGCGCCGAAGAATTCGCTAGGCAACAGGGTGTGGAGGTTGTGGACAACGATTACTTTATCACACCTGACAATGTTGGCATGTTGAAGCTGGCAAAGGAAGCAAACACAATCCTGTTTGATTACCGAATCCCGAGCTCGGGCTACGAGACATGTGGATCTGGTGTGGAGAGTCCACTGCAGATGAATGGACTCCCCATAAGCGTGTACGCGCCGGAGACCGTTGGATGCGTGGTGGTGGACCGGGAGGGGCGGTGCGCGGCGGCGACATCAACCGGTGGACTGATGAACAAAATGACCGGTCGAATCGGTGACTCGCCGCTGATAGGCGCTGGGACCTACGCGTGCGAGGTGTGTGGGGTTTCGTGCACGGGTGAGGGCGAGGCCATCATACGTGGCACTCTGGCACGTGAGGTGGCAGCGGTGATGGAATACAAAGGCTTGAAGCTTCATCAAGCCGTTGATTTTGTGATCAAACACCGTCTTGATGAAGGAAAAGCTGGCCTCATTGCAGTTTCCAACACTGGGGAAGTGGCTTGTGGCTTCAATTGTAATGGCATGTTTAGGGGTTGTGCCACCGAAGATGGCTTCATGGAGGTTGGAGTTTGGTAA 1053 0.5404 MELLGFGSLRNPEKESQGSRAEGEKMGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALRSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPVSLARLVMEKSPHSYIGFSGAEEFARQQGVEVVDNDYFITPDNVGMLKLAKEANTILFDYRIPSSGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLHQAVDFVIKHRLDEGKAGLIAVSNTGEVACGFNCNGMFRGCATEDGFMEVGVW 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02195 350 CDD Asparaginase_2 30 343 - -
Spst8g02195 350 FunFam Isoaspartyl peptidase/L-asparaginase 221 350 - -
Spst8g02195 350 Gene3D (Glycosyl)asparaginase 221 350 - -
Spst8g02195 350 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 29 347 IPR029055 -
Spst8g02195 350 PANTHER L-ASPARAGINASE 29 337 IPR000246 GO:0016787
Spst8g02195 350 Pfam Asparaginase 29 349 IPR000246 GO:0016787
Spst8g02195 350 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02195 Spst-Chr8 31693504 31695075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02195 31 285 Miscellaneous Gene Families AT4G00590 29.137 7.75e-17 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02195 8 31693504 31695075 Spst8g02195 8 31693504 31695075 ECH
Spst8g02195 8 31693504 31695075 Spst9g00493 9 4433880 4435621 PCT