Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02188 ATGAGTAGCATGCCTGCAAAATTGTTGTTCACAACTTTGTACATCCTCTTGGTCTCTCTTCCTATGCACATGTCACCACATGATGTTAAGATAGGCTCAAAGCAGTTCAGAAGTAGTAGTAGTGGCCACAGGAGCAAAGGTAGTGGTGATGGATCAGCCAAAGGTTGCAACCACAACAACAGGCCATTGGGCACAAACACAACACCATGCCAAAAATCAACAGCCATTCAAGCAGTTCCAGCTTCACCTCCTCTTGTATTTGCAGACCAAAGACTTGAAGTAGTGTATCCAACAATCCAAAGATTCAAGTCCAGCATCACCTCAGATCCTCTAGGAGTGACCAAAACTTGGGTAGGATCAGACATATGCAGCTACAAAGGCTTCTACTGTGACACACCCCCTGACAACAGTTCTGCCACTGCTTTGGCCTCTATTGACTTCAATGGTTTTCAACTTGCAGCTTCCACCCTTGATGACTTCATTGATAACCTCCCTGATATTGCTCTCTTCCATGCAAATTCCAACAATTTTGGTGGCACCATCTCACCCCAAATAGCCAAACTCCCTTACCTCTATGAGCTTGATGTTAGCAACAACCAATTATCTGGTCCATTTCCCACTGCTGTTCTAGGAATGAGTACTCTAACATTCTTGGACTTAAGGTTCAATTTCTTCTCTGGGGAAGTGCCACCACAAATATTCATACAGAACCTCCAAGTCCTTTTCATAAACAACAACATCTTCACTCAAGGGTTGCCAGATAACCTAGCCACCACTCATATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATCCCAAGAAGTCTTCCAAAGGCTTTGTCCTCTCTGAGTGAAGTATTGTTACTTAACAACCAGTTAACAGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCCACGGTGTTTGATGCTGGCAACAACCAATTGACAGGTCCTTTGCCTTTGTCTTTGAGTTGTCTTGAGAAGGTGGAGGTGCTAAATTTGGGTGGTAACCTTCTGTATGGTATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTCACACAAGTGGGGCCACTGTGTAGGATGCTGATTCAGAGAGGGGTTCTTGATGTTAGGAACAATTGTATTCCTGATCTTCCGTTTCAGAGATCAGTGATGGAGTGCGCTGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTTACAGCCTCATCCCATGTAAGCTTCCTTTTCAAAATCCCATTCCTTAG 1305 0.4383 MSSMPAKLLFTTLYILLVSLPMHMSPHDVKIGSKQFRSSSSGHRSKGSGDGSAKGCNHNNRPLGTNTTPCQKSTAIQAVPASPPLVFADQRLEVVYPTIQRFKSSITSDPLGVTKTWVGSDICSYKGFYCDTPPDNSSATALASIDFNGFQLAASTLDDFIDNLPDIALFHANSNNFGGTISPQIAKLPYLYELDVSNNQLSGPFPTAVLGMSTLTFLDLRFNFFSGEVPPQIFIQNLQVLFINNNIFTQGLPDNLATTHILLLTLANNKFMGPIPRSLPKALSSLSEVLLLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNLGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTQVGPLCRMLIQRGVLDVRNNCIPDLPFQRSVMECAEFFATPRMCPFMWFYSLIPCKLPFQNPIP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02188 434 Gene3D Ribonuclease Inhibitor 98 260 IPR032675 -
Spst8g02188 434 Gene3D Ribonuclease Inhibitor 261 404 IPR032675 -
Spst8g02188 434 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 47 425 - -
Spst8g02188 434 MobiDBLite consensus disorder prediction 32 69 - -
Spst8g02188 434 Pfam Leucine rich repeat N-terminal domain 100 131 IPR013210 -
Spst8g02188 434 SUPERFAMILY L domain-like 102 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02188 Spst-Chr8 31536511 31537815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02188 77 411 Leucine-rich Repeat extension Gene Families AT3G24480 42.687 5.83e-86 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02188 8 31536511 31537815 Spst8g02188 8 31536511 31537815 ECH