Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02182 ATGAACAATTCCCTCTTTCTCCACAACGCAAACTCAATCAGCTTCACCTTTCACTCCGCATTATCACAAACACAACGAAGGCACCTTCCTGCAAACAAACCCTTCTCTCATCGTTACCCACGCATCCAATGCTGCTGCATCGAAATCGACATGGTCAAGAACTCTCAAGGCATTTACGCCCCCAGAAATGACAAGGTCGTCGTTCTCTGGGACCTCGACAACAAGCCCCCTCGCGGCCCCCCATACGACGCTGCGGTTTCGCTCAAAACCCTCGCATCCCGCTTCGGCGACGTCACCGACTTCTCTGCCTACGCCAACCGTCACGCCTTCGTCCACCTCCCCCAGTGGGTCCTCCACGAGCGACGCCAACGCAGAAGCCTCGACATTCTTGAACGAAAGGGTGTCGTCACACCCTCGGAACCCTACACGTGCGGCGTGTGCGGGCGCAAATGCAAGACCCACATGGACCTGAAGAAGCACTTCAAGCAGCTGCACCAGCGCGAGCGACAGAAGAAGCTGAATCGGTTGAAGTCGCTGAAGGGGAAGAAGAAACGGGACCGTTTCAAGGAACGGTTTTTGCGCGGGAATCATAAGTATGACGAGGCGGCGAGGACTCTGGTGGTGCCGAAGGTGGGGTACGGGCTTGCGGCGGAGCTGCGACGGGCGGGAGTGTTTGTGAAGACTGTGCAGGACAAGCCGCAGGCGGCGGATTGGGCGCTGAAGAGGCAGATGGTGCATTCGATGAGTCGAGGGATTGATTGGCTATTTTTGGTTTCGGATGATTCGGATTTTTCGGAGATGTTGAGGAGGGCGAGGGAGGCGGATTTGGGGACTGTGGTGGTTGGGGATTGGGACAGAGCGTTGGGCAGGCACGCAGATTTGTGGGTGCCATGGAGTGGGGTTGAGAATGGGGAAGTGGATTTGGTGCCCAAGAGAAGGAGTGAGAGGAAGAAGAGCAGAGACCATGGTTTTCAAGATGATGATGAGCTTGATCATCATGATGTGGGGCTTTTGAATGAAGATGAGGAATTCGGGCAACAGTTTATGTTGCATAGTGAGGATGAGGACGTGGAGGACTATTATTACGATGATTATGATGATGACGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGATGGGTTGTATATTTTTTGA 1155 0.5385 MNNSLFLHNANSISFTFHSALSQTQRRHLPANKPFSHRYPRIQCCCIEIDMVKNSQGIYAPRNDKVVVLWDLDNKPPRGPPYDAAVSLKTLASRFGDVTDFSAYANRHAFVHLPQWVLHERRQRRSLDILERKGVVTPSEPYTCGVCGRKCKTHMDLKKHFKQLHQRERQKKLNRLKSLKGKKKRDRFKERFLRGNHKYDEAARTLVVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDRALGRHADLWVPWSGVENGEVDLVPKRRSERKKSRDHGFQDDDELDHHDVGLLNEDEEFGQQFMLHSEDEDVEDYYYDDYDDDEEEEEEEEEEDGLYIF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02182 384 MobiDBLite consensus disorder prediction 356 384 - -
Spst8g02182 384 Gene3D - 60 299 - -
Spst8g02182 384 Coils Coil 162 182 - -
Spst8g02182 384 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
Spst8g02182 384 MobiDBLite consensus disorder prediction 350 384 - -
Spst8g02182 384 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 47 376 - -
Spst8g02182 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Spst8g02182 384 CDD PIN_LabA-like 152 283 - -
Spst8g02182 384 MobiDBLite consensus disorder prediction 310 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02182 Spst-Chr8 31422023 31423177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02182 15 359 C2H2 Transcription Factor Family AT5G52010 61.944 1.17e-154 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst8g02182 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02182 8 31422023 31423177 Spst8g02182 8 31422023 31423177 ECH