Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02174 ATGGAAGACCAAGCGCGCGATGCACTACCACCTGGTTACCGGTTCTACCCGTCCGAGGAGGTGCTCCTCCGCTATTACTTAACCAAGAAAAACGAGAACCGGGAGGGGGGTTTCAAAGGTTCTGATTTGATCAAGGAACTGGACCTGTACGATCACGACCCCTTCGAATTACCAGAAGTTGCGTGCTTTCCGTATGGTTACGGAGGGAGGAAGAAACATTGGTTCTGTTACACCGTTAAAGAGACCAAACGCGGAAGCAGAAAGGTTAAAAGCGGGTTCTGGCTGCGGAAGGGAAGGATTCGGGATATTCGCGATAACGGTGGGATTGGGAACGCTGTTTTGGGCACGAGGTCGCGTTTCGTTTTCTATGTCGGGAATTCGCTGAAAAACGCTACCAAAACGGATTGGATTTTGTACGAGTATGCATTGGTTGACCAAATTCTGGCGTCGTTCGTGCTTTGTCGTGTGGTGAATAAGCCTCATCATAAGAATAGTCCATCAGAGATTGGTCTCAGTTGTTGTGCTGAAGAGAGTGCCGCGGTGGCTGTGCGTCACGTTGGTGTTCAGCATGATGGATGTATCGGAGGTGATGTTGAAGGTAAGGTGTGTGATGATGGTTTTGTTAATAGAGAGGCTGAGGCTGCTGAGAATCCAATTAGGTGTGGTGGTGAACATGATGATAATGCTGCACCTGTTTCAGTTGCTCAGGGAAGTCAGCCGATTCATGAAAGGCCTTCTGGACTTCCCTGTGGCAGTTCATTGTTCGTTGAAGCTGTGACATCTCAGCAACAACTGCTGTCCATTCTAGAGGAAGATTTCATAGAATTGAATGATATTGCATGA 843 0.4816 MEDQARDALPPGYRFYPSEEVLLRYYLTKKNENREGGFKGSDLIKELDLYDHDPFELPEVACFPYGYGGRKKHWFCYTVKETKRGSRKVKSGFWLRKGRIRDIRDNGGIGNAVLGTRSRFVFYVGNSLKNATKTDWILYEYALVDQILASFVLCRVVNKPHHKNSPSEIGLSCCAEESAAVAVRHVGVQHDGCIGGDVEGKVCDDGFVNREAEAAENPIRCGGEHDDNAAPVSVAQGSQPIHERPSGLPCGSSLFVEAVTSQQQLLSILEEDFIELNDIA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02174 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 168 - -
Spst8g02174 280 Pfam No apical meristem (NAM) protein 10 143 IPR003441 GO:0003677|GO:0006355
Spst8g02174 280 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
Spst8g02174 280 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Spst8g02174 280 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02174 Spst-Chr8 31145014 31147260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02174 9 204 NAC Transcription Factor Family AT1G32510 32.075 1.16e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst8g02174 NAM 1.4e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02174 8 31145014 31147260 Spst8g02174 8 31145014 31147260 ECH