Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02158 ATGGATGGAATTTTCGCTTACATCATTGTCATTTTGCTTACCTTATTTTCATTCATCTTCTTACCAAAACTATACATAAGAAAACCTCAGAACCAAACAAGCGCAAAGCTCCCCCCAGGTTCAATGGGATGGCCGTACATAGGAGAAACCCTCCAACTCTACTCCCAAGACCCAAATGTCTACTTTTCCGCCAAACACAAAAGGTTTGGTGAAATATTTAAGACCAACATCCTGGGTTGTCCCTGTGTGATGCTGATCAGCCCTGAGGCTGCACGCTTTGTGCTGGTGACTCAAGCTCACTTGTTCAAACCAACATACCCGAAAAGCAAAGAGCGTTTGATTGGTCCTTTTGCATTGTTTTTCCACCAGGGAGACTACCACACGCGTCTGAGGAAGCTTGTGCAGAGGTCACTTTCTTTTGAAGCACTTCGCAACTTGGTGCCTCATATTGAAGCCTTGGTGTTATCTGGCATGAACTCTTGGGGTGATGGCCAAGTCATTAACATGTTTAAGGAAATGAAAAGGATTTCTTTTGAAGTTGGAATCCTCACAACTTTTGGCCATCTAGAGCCACGTTTGAGGGAAGAGCTAAAGAAGAATTACCGGATTGTGGACGCTGGTTACAATTCCTTCCCTACGTGCATTCCAGGAACCCAATACAAAAAAGCACTGTTGGCTAGAAAGAGACTTGGCAAGATTATAAGTGATATAATCTGTGAGAGGAAGGAGAAGAAATTGGTTGAAAGGGATCTGTTGAGTTGTCTGTTGAATTGGAAAGGTGAAGGAGGACAAGAGTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGCCATGACATGGGTTGTAAAGTACCTGCATGATGAACCGAAACTTCTGGAGTCAGTAAAGGTGGAGCAGAAGGCAATTCACAATTCTAATGAAGGTAACCTACCACTGAGTTGGGATCAGACCAGAAACATGAGAATTACTCACAAGGTTGTGCTAGAGAGTTTGAGAATGGCAAGCATTATATCATTCCCTTTCAGAGAAGCAATAGCTGATGTGGAGTACAAGGGATTCTTAATACCAAAAGGATGGAAAGCGATGCCTCTATTCAGAAATATTCACCACAATCCTGAATTTTTCCCAGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTGGCACCAAAGCCCAACACTTTCATGCCATTTGGTAGTGGAGTACATGCATGCCCTGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAATTTAGGTGGGAAGTGGTAGGATCCAAGTGTGGAATTCAGTATGGTCCATTCCCCTTGCCACTGAATGGACTCCCAGCTAGGACCACTCTCCCAAATAACGGGGTGGACCTCAACCTGGCCTTGTCATTGAACATTGATTCCCATTGGTCATATAGCTTGTTTCCTTTGAGCCAGGCTTTGGTGTTCTGA 1500 0.44 MDGIFAYIIVILLTLFSFIFLPKLYIRKPQNQTSAKLPPGSMGWPYIGETLQLYSQDPNVYFSAKHKRFGEIFKTNILGCPCVMLISPEAARFVLVTQAHLFKPTYPKSKERLIGPFALFFHQGDYHTRLRKLVQRSLSFEALRNLVPHIEALVLSGMNSWGDGQVINMFKEMKRISFEVGILTTFGHLEPRLREELKKNYRIVDAGYNSFPTCIPGTQYKKALLARKRLGKIISDIICERKEKKLVERDLLSCLLNWKGEGGQELSDDQIADNIIGVLFAAQDTTASAMTWVVKYLHDEPKLLESVKVEQKAIHNSNEGNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSKCGIQYGPFPLPLNGLPARTTLPNNGVDLNLALSLNIDSHWSYSLFPLSQALVF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02158 499 CDD CYP90-like 67 464 - -
Spst8g02158 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Spst8g02158 499 FunFam Abscisic acid 8 27 467 - -
Spst8g02158 499 SUPERFAMILY Cytochrome P450 33 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PANTHER CYTOCHROME P450 26 35 453 - -
Spst8g02158 499 Pfam Cytochrome P450 38 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 Gene3D Cytochrome P450 26 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02158 499 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02158 Spst-Chr8 30841212 30846807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02158 7 463 Cytochrome P450 AT3G19270 65.721 0.0 645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02158 8 30841212 30846807 Spst3g02185 3 61028346 61031499 ECH
Spst8g02158 8 30841212 30846807 Spst8g02158 8 30841212 30846807 ECH