Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02154 ATGGAAGTTTCATGTCTTCAGAAGTTGGTGAAGACAGCCCCATCTAAAGCATTGGTCATCAGAATCAATTTGGTCTGTCTTGCCATCTTTCTGGTTGTTTATGCAACCCTTCTTCTGCGACCATCTTCTTCAGTCTACTTTCAGAATGCAGCCTCCCTTGTTAGGTGCTCCTTGAGGGAGTGTCATCACAAGGAAGAAAAAAGCATAAAGATGAAAGCAGTGTTGGAGGAACCACAACTGAAGCCTAGGATGCCAAAGCAGAATGCGACTAAGATAGAGGTGCCTAGCTTCTTTGCTGAAATGGGGAAAGGAATGAAGATGGGAATGGTGAACATGCATGAAGATGATATGGGTGAATGGAGCACCCTTGGAGAAACAGCACATGTTTATTTCGAAAGGGTGTCACAGTTTTTCAATTGGACAGATTTATTTCCAGAATGGATAGATGAAGAGGAAGAGAGTGATGTTCCATCATGCCCCGAGATACCAATGCCAGAGTTTGCAGCATATGATGACATGGACGTTATCATAGCCAAGTTGCCATGCAAGTACCCTGAAGAAGGGTGGGGAAGGGATGTTTTCAGGTTACAAGTTCATATGATTGTGGCCAGTTTGGTAGTGAAGAAGGGGAAGAAGGATTGGAATTGGAATTGGAAGACAAAAGTGGTTTTATGGAGCAAGTGTAGGCCAATGCTGGAGCTGTTTAGGTGCAATGATTTGGTTAAGCAGGAAAATGAGTGGTGGTATTATGAGGTTGATGTGAAGAGATTGGAGCAGAAGGTTTCTTTGCCGGTTGGATCATGCAATTTGGCGCTGCCTCTATGGGATGAAGGAATCGACAAGGTGTACGACACGTCGACCCTGGAAAAGAGCGTTGAAAGCGAAGCTCGAGCGAAACGCGAGGCCTACGCAACGGTTCTCCACTCATCGGAAGGGTACGTGTGCGGCGCAATAACGCTGGCGCAGACGCTTCTCCGGACCGGAACCAAACGCGACCTCGTGCTCCTTCTGGACAGCTCCATCTCCGCCGCCAAGCGCCGCGCCCTCGAGCTCTCCGGTTGGAAGACCCGAGTCATCACCCGGATCCGGAATCCGCGCGCCGAGAACGGCACCTACAATGAGTACAACTACAGCAAGTTCCGGTTGTGGCAGTTGACGGAGTACGAGAGAGTGATCTTCATCGACGCCGACATCATCGTCCTCCGCAACCTCGACATCCTCTTCTACTTCCCCCAGATGTCCGCCACCGGTAATGACCAGTCCATCTTCAACTCCGGCATCATGGTTCTCGAACCTTCCAACTGCACCTTCGATGTTCTCATGTCGCGTCGCCACGATGTCGTTTCCTACAACGGGGGCGACCAGGGTTTCCTGAACGAGATATTCGTGTGGTGGCACAGGCTTCCCCGCCGCGTGAACTTTCTGAAAAACTTCTGGGCGAACACGACGTTGGAGGCGAGTGTGAAGAACGCAATGTTCGGCGCTGACCCTCCGAAGCTCTACGCGATCCACTACCTGGGCCTCAAGCCCTGGCACTGCTACAGGGACTACGACTGCAACTGGGACGTGGAAGATCAGAGGGTCTACGCCAGCGACGTTGCACATCGACAGTGGTGGAAGGTCCACGACTCCATGGACCACCGCCTGCAGAGCCTCTGCCGGTTGACCCGAAAGCGAAGGACCGAACTCAACTGGGAGAGGCGAAAGGCCGGGAAGCTAGGGTTGCCGGATATGCATTGGAAGATCAATGTCACCGATCCCAGAAAACAAGGCTCGCTTTTGATTGATTAG 1791 0.5142 MEVSCLQKLVKTAPSKALVIRINLVCLAIFLVVYATLLLRPSSSVYFQNAASLVRCSLRECHHKEEKSIKMKAVLEEPQLKPRMPKQNATKIEVPSFFAEMGKGMKMGMVNMHEDDMGEWSTLGETAHVYFERVSQFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFAAYDDMDVIIAKLPCKYPEEGWGRDVFRLQVHMIVASLVVKKGKKDWNWNWKTKVVLWSKCRPMLELFRCNDLVKQENEWWYYEVDVKRLEQKVSLPVGSCNLALPLWDEGIDKVYDTSTLEKSVESEARAKREAYATVLHSSEGYVCGAITLAQTLLRTGTKRDLVLLLDSSISAAKRRALELSGWKTRVITRIRNPRAENGTYNEYNYSKFRLWQLTEYERVIFIDADIIVLRNLDILFYFPQMSATGNDQSIFNSGIMVLEPSNCTFDVLMSRRHDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNAMFGADPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRQWWKVHDSMDHRLQSLCRLTRKRRTELNWERRKAGKLGLPDMHWKINVTDPRKQGSLLID 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02154 596 CDD GT8_Glycogenin 301 545 - -
Spst8g02154 596 PANTHER GLYCOGENIN SUBFAMILY MEMBER 189 590 - -
Spst8g02154 596 SUPERFAMILY Nucleotide-diphospho-sugar transferases 301 550 IPR029044 -
Spst8g02154 596 Pfam Glycosyl transferase family 8 371 512 IPR002495 GO:0016757
Spst8g02154 596 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 299 549 IPR029044 -
Spst8g02154 596 FunFam Hexosyltransferase 298 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02154 Spst-Chr8 30757999 30762312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02154 71 595 Glycosyltransferase AT4G33330 65.414 0.0 733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02154 8 30757999 30762312 Spst8g02154 8 30757999 30762312 ECH
Spst8g02154 8 30757999 30762312 Spst9g00452 9 3982474 3985870 PCT