Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02134 ATGGAAGAAACGAAAGGGTTTGTTTATCAAACTCCATACAAAAGTGATGAGGGACACTTAATCACAGTGCTTAGTATTGATGGTGGTGGCATTCGGGGAATCATTCCAGGAGTAATACTGGCTTTCCTAGAAGCAGAGCTTCAGAAGCTGGACGGTGATCATGTAAGGCTAGCAGACTACTTTAATGTGATTGCAGGAACAAGCACTGGGGGATTAATTACTGCAATGCTTACTGCTCCGAATCAAAATAACCGACCTTTGTATGCAGCCAAAGATATTAAGGATTTCTACCTTCAGCATGGCCCAAAAATCTTCCCCCAGATTAATTCGGCAGAGCTCTGGTTGGACCACAGTACGACGGCAACTATTTACACAAGCTCCTCAGGGGAAACAAAACTTCAACAAACATTAACCAATGTCGTTATCCCAGCATTTGATATCAAACATCTTCAACCCACCATTTTTTCCAGCTTCCAGTTGAAGAAGAGGCCAGATTTGAATGGTTTGTTGTCGGATATATGCATTTCAACTTCAGCAGCTCCAACCTATCTTCCAGCTCATTCCTTTGAAACCAAAACCCACCATGGCAATGTCATGGGCAAGTTTGACCTAATAGACGGTGGTGTCGCAGCAAATAATCCGGCACTGGTGGCCATGGCAGAAGTGACAAACCAAATTTCCCTTGAAGGGCCATGTGCTAGCTTGAATGTGAAACCGATGGAATATGATAGTTTTTTGGTGATATCATTGGGAACAGGTTCTCAGAAACAGGAAAAGAAATACAGTGCCGCTGAGGCAGCTCAATGGGGCATCTTCAGTTGGCTTTCCACAGCCAATGGTGGCACCCCTCTGATCGATGCCTTCACTCAAGCCAGTTCTGACATGGTTGATTTCCACATCTCCTCCGTATTCCAAGCACTCCGTTCCGAACACAACTATCTCAGAATCCAGGACGATACTTTAACTGGGGACTTATCTTCGGTTGACGTGGCCACGGAGAAGAATTTGAATGGTCTCGTCCAAGTTGGGGAATCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGAGGACTGGTGTTCATGAACCTGTTGACTCTCATGAAACAAATGCAGATGCCTTGAAAAGGTTTGCAGAGCGACTGTCCAAACAGAGGAGATATCGTAAATCTCAAATGTATGCGAATAATGGAAATCTTTAA 1200 0.4383 MEETKGFVYQTPYKSDEGHLITVLSIDGGGIRGIIPGVILAFLEAELQKLDGDHVRLADYFNVIAGTSTGGLITAMLTAPNQNNRPLYAAKDIKDFYLQHGPKIFPQINSAELWLDHSTTATIYTSSSGETKLQQTLTNVVIPAFDIKHLQPTIFSSFQLKKRPDLNGLLSDICISTSAAPTYLPAHSFETKTHHGNVMGKFDLIDGGVAANNPALVAMAEVTNQISLEGPCASLNVKPMEYDSFLVISLGTGSQKQEKKYSAAEAAQWGIFSWLSTANGGTPLIDAFTQASSDMVDFHISSVFQALRSEHNYLRIQDDTLTGDLSSVDVATEKNLNGLVQVGESLLKKPVSKINLRTGVHEPVDSHETNADALKRFAERLSKQRRYRKSQMYANNGNL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02134 399 PANTHER XYLOSE ISOMERASE 14 390 - -
Spst8g02134 399 FunFam Patatin 13 393 - -
Spst8g02134 399 SUPERFAMILY FabD/lysophospholipase-like 21 374 IPR016035 -
Spst8g02134 399 Gene3D Cytosolic phospholipase A2 catalytic domain 9 394 - -
Spst8g02134 399 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 219 IPR002641 GO:0006629
Spst8g02134 399 Pfam Patatin-like phospholipase 24 219 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02134 Spst-Chr8 30265290 30268378 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02134 18 388 Miscellaneous Gene Families AT2G26560 59.375 3.40e-153 437
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02134 8 30265290 30268378 Spst8g02134 8 30265290 30268378 ECH