Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02120 ATGAGTCCAATGTTGTCAAACAAAATTCTTTTGTGGGTCATGTTTGTGTATTGGTGCCACTTTGCGATCTCATGCAAGGCCAACGAACAAGGGGAATATCTGTTTAAGTTACTTCGATCAAAGAGGGGTCAGAAAGTGATCTCAGATGATGGAGAAGCTTCAAGTGCCAAAAATGGTGGTGATGAAGATGTTTGGAAGGTTGAGGAAGAAAGGGTGTTGATGGAAGATGACAAAGTGAAGGTGGCAAATGTTATTTTCCTGGAGTCTCCTGCAGGAGTTGGGTTTTCATATTCAAACACTTCTTCTGACTACTCTAAAGCTGGAGACAAGAGCACAGCCATGGACTCTTACACTTTTCTTCTAAACTGGCTTTACAGATTTCCACACTACAAATCTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTCAAACTATTCTCCATAACAATAAATTTACAAATCACACAGTCATTAACCTCAAAGGGGTTGCGATTGGGAATGGTTGGATAGATGATAATATGTGTACAAAGGGAATGTATGATTATTTCTGGACACATGCTTTGAACTCTGATGAAACCCATGAAGGAATTGAAAGGCATTGTGACTTTGAGAGTGGTAACTTCACAAGTGAGTGCAACAAATATCAAAGTAGAGGGTATGATGAGATTGGAGTCATTGACATATATGACATATATGCTCCCCCTTGTGACGCAAGTCCTGCCACTGTCTCTAACAGCAATTTCGACCCTTGTTCTGACGAGTATACAAAATCCTACTTAAATCTGGCCCAAGTACAAGAGGCTCTTCATGCTAAACCCTCAGAATGGTCTCCTTGCAGTGAGGTGGGATGGACTGATAGCCCAGCAACAATTCTACCAACTATAAATCGGTTAATATCAAGTGGCATAAGAACCTGGATATACAGTGGTGATACTGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAGTAAATGCCTTGAAGCTTCCTGTGGAGACAACATGGCGTCCATGGTATTCGGGAAATGAGGTTGGAGGATACTTGGTTGGGTACAAGGGGCTCACCCTCATCACTGTAAGAGGAGCTGGTCACATGGTTCCAAGTAACCAACCACAGCGAGCGTTAACCATGATCTCATTTTTTCTTCGCGGAGAACTTCCTCCCGAATTAAGCTCATAG 1206 0.4254 MSPMLSNKILLWVMFVYWCHFAISCKANEQGEYLFKLLRSKRGQKVISDDGEASSAKNGGDEDVWKVEEERVLMEDDKVKVANVIFLESPAGVGFSYSNTSSDYSKAGDKSTAMDSYTFLLNWLYRFPHYKSRDLFITGESYAGHYVPQLAQTILHNNKFTNHTVINLKGVAIGNGWIDDNMCTKGMYDYFWTHALNSDETHEGIERHCDFESGNFTSECNKYQSRGYDEIGVIDIYDIYAPPCDASPATVSNSNFDPCSDEYTKSYLNLAQVQEALHAKPSEWSPCSEVGWTDSPATILPTINRLISSGIRTWIYSGDTDGRVPITSSRYSVNALKLPVETTWRPWYSGNEVGGYLVGYKGLTLITVRGAGHMVPSNQPQRALTMISFFLRGELPPELSS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02120 401 FunFam Carboxypeptidase 299 393 - -
Spst8g02120 401 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 80 380 IPR001563 GO:0004185|GO:0006508
Spst8g02120 401 ProSitePatterns Serine carboxypeptidases, serine active site. 137 144 IPR018202 GO:0004185
Spst8g02120 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 363 376 IPR001563 GO:0004185|GO:0006508
Spst8g02120 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 148 IPR001563 GO:0004185|GO:0006508
Spst8g02120 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 87 97 IPR001563 GO:0004185|GO:0006508
Spst8g02120 401 ProSitePatterns Serine carboxypeptidases, histidine active site. 363 380 IPR033124 GO:0004185
Spst8g02120 401 Gene3D - 299 393 - -
Spst8g02120 401 FunFam Carboxypeptidase 84 246 - -
Spst8g02120 401 Gene3D alpha/beta hydrolase 59 246 IPR029058 -
Spst8g02120 401 Gene3D - 259 290 - -
Spst8g02120 401 Pfam Serine carboxypeptidase 80 392 IPR001563 GO:0004185|GO:0006508
Spst8g02120 401 SUPERFAMILY alpha/beta-Hydrolases 79 394 IPR029058 -
Spst8g02120 401 FunFam Carboxypeptidase 257 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02120 Spst-Chr8 30013946 30017564 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02120 8 30013946 30017564 Spst8g02120 8 30013946 30017564 ECH