Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02119 ATGATGCAGAGAAGTTCGACAATTGCAAATAAAGGTGGAAAAGCTTCTAATAGAGAAAGAAAATTGGCTTTGAAACAAGATGTGGATAGGTTGAAAAAGAAGCTTAAGCATGAAGAAAACATTCATAGAGCATTGGAGAGGGCTTTCAACAGGCCATTGGGAGCTTTACCTCGTCTTCCTCCTTATCTCCCTCCATATATACTAGCCCTTCTGGCTGAAGTGGCAGTTCTGGAAGAGGAAATTGTCAGGCTTGAAGAGAAGGTTGTGCATTTCAGACAGGATTTGTATCAGGAAGCTGTCTATATGTCATCTTCTATGAGGAAGCTTGATCATCCAGTTTCATCTCCTCCAAACAAGTCAAACTCAACAATGGATAGTCCCAAGTTGGATAAATTGAAGTTTCAGTCCCAGACAGCTGGTGATCGAGCGGCAACATCTGCAACTAGGCCAACCACAACACTCACAGAGGATATGGAGAATCAATCCTGTAGTAATTCTTCCGAGAGCAGGAAGCAATCCTCCAACCAAATGAACAAATATCCAATTAAGAAACTTGACAATAAATCGCTGCAGAAAAGGTTGGATCCTCCAAAAATAAAGCAAGAACCAAGGCTGAACGGCCAGCAAATTGCAGAGTTGAGAAACCATTGTCTACATAAAAATTCACCAGAATCTGAGAGGCCAAATATAATTTCGGAAAATATTGTGAAGTGCTTATCAAGAATTCTCTTGAGAATGAGTGCTGTGAAGAATCCAGGTTCTGCATGTGATATTCCACACTTGTGGGATCTAAAACCTAAAATATGTGACGAGGAAGCAGAGTTTGAGGATCCATATGGCATCTGTTTGAAATTTGGGAAGAGGGATATTGGTCCATACAAGCAATTATGTGCAATTGATGCTAAATCTTTCAATCCAAAACGAACTGCAAATACTTTGTTTTTACTGCATCGTTTGAAACTTCTTTTTAGGAAACTAGCCTCTGTCAACCTAGAAAACCTCAACCATCAGGAGAAGCTTGCATTCTGGATCAACACCTACAACTCGTGTATGATGAATGCATTCATAGAGAATGGCATACCAGAGAGTCCTGAAATGGCTGTTACACTGATGCGGAAGGCAACAATTAATGTTGGTGGACACGTGCTAAGTGCAACAACCATTGAGCATTTCATTCTAAGACTTCCTTATCATTGGAGATTTACCTTTTCCAAGGGGACAAAAAATCAAGAAATGACAGCAAGAAGCATGTATGGACTAGAACTGTCGGAACCCCTTGTGACATTTGCTCTATCTTGTGGAACCTGGTCTTCTCCTGCTGTGAGAGTTTACACTGCATCTCAGGTTGAGAATGAACTGGAAGTGGCTAAAAGAGAGTACTTACAGGCAGCAATTGGATTTTCATCTTCAAAGTTTGCTATACCTAAGCTGTTGGATTGGTATTTACTGAACTTTGCAAAAGACTTGGAATCATTGCTGGACTGGATCTGCCTCCAGTTACCAAGTGAACTGGGGAAACAAGCCATAAAACTCTTAGAGGAAAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATAATGCCATATGAGTTCAGCTTTAGATACTTGATATGCACATAA 1620 0.4043 MMQRSSTIANKGGKASNRERKLALKQDVDRLKKKLKHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEKVVHFRQDLYQEAVYMSSSMRKLDHPVSSPPNKSNSTMDSPKLDKLKFQSQTAGDRAATSATRPTTTLTEDMENQSCSNSSESRKQSSNQMNKYPIKKLDNKSLQKRLDPPKIKQEPRLNGQQIAELRNHCLHKNSPESERPNIISENIVKCLSRILLRMSAVKNPGSACDIPHLWDLKPKICDEEAEFEDPYGICLKFGKRDIGPYKQLCAIDAKSFNPKRTANTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINTYNSCMMNAFIENGIPESPEMAVTLMRKATINVGGHVLSATTIEHFILRLPYHWRFTFSKGTKNQEMTARSMYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREYLQAAIGFSSSKFAIPKLLDWYLLNFAKDLESLLDWICLQLPSELGKQAIKLLEERKTEPLSQFVQIMPYEFSFRYLICT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02119 539 MobiDBLite consensus disorder prediction 105 200 - -
Spst8g02119 539 MobiDBLite consensus disorder prediction 1 20 - -
Spst8g02119 539 PANTHER EXPRESSED PROTEIN 9 537 - -
Spst8g02119 539 Coils Coil 14 48 - -
Spst8g02119 539 MobiDBLite consensus disorder prediction 108 182 - -
Spst8g02119 539 Pfam Protein of unknown function, DUF547 332 461 IPR006869 -
Spst8g02119 539 Coils Coil 67 94 - -
Spst8g02119 539 MobiDBLite consensus disorder prediction 185 200 - -
Spst8g02119 539 Pfam Leucine-zipper of ternary complex factor MIP1 17 98 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02119 Spst-Chr8 29933895 29936818 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02119 8 29933895 29936818 Spst8g02119 8 29933895 29936818 ECH
Spst8g02119 8 29933895 29936818 Spst9g00435 9 3865884 3874331 PCT