Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02099 ATGGCCTTCAACGACTTCTTCGCCGGCGAGATCGCGACGGAGCTTCTGAAAATGCTGATCAACATATCCCGGAAGTCCCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCACCTACATCCACGACCTCCTCCCCACCATCGAGGAGATAAAGTACTCCGGCGTCGAGCTCCCCGCCCAGCGCCAATCCCAGCTCATGCGGCTCTCCGAGCTCCTCCGTTCCGGCGTCGACCTCTCCCACAAGGTCCTCGCCTCCAGCCGCTGGAACGTCTACCGCAATCTCCACCTCGCCAAGAAAATGGACAAGCTCGAGAAGACAGTTTCCAAGTTCCTCCTCGGACCCATGCAGGCCCACATCATGGCCGACGTCCACCACGCACGCTTCGAGATGGCCGAGCGCTTCGACCGCGTAGACAACTCCATCCACCGCCTGGAGCAGTACTTCGGGAACATTAAGATTGGCGTTGGCGGCGGTGGCTGGGTCGAGGAGGCTGTCAGGAGCGTGGATGAGGATGTTGTTGACGGCAGCTCCGCCGTGGGGTTGGGATTCGGGAAGATTAAGGTAAGGGAGATGGTTGTCGGGAGGGAAGATCTCTGGGTTGTCGGGATTTCTGGGATTGGAGGCTCCGGGAAGACCACTCTCGCTAGAGAGGTCTGCAAAGATCATCAAGTTAGATGTTATTTCAGGGAGAGGATTTTGTTCCTGACTGTATCGCAGTCTCCAAATGTGGAGCAACTAAGGACGAAGATTTGGGGGTATATCATGGGCAACGAGAGATTGGATGCAAATTATGTGGTTCCGCAGTGGATGCCACAGTTTGAGTGCAAAAGCGAAGCAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACTCTCTCTGTGGTGGAGCAGCTTGTGTGCAGAATACCAGGTTGCAAGTTTCTTGTCGTGTCCAGGTCTAAATTCCAAACGGTGTTGAGTTACGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTCAGCTGCTAATGAGAATTTGGTCAAGCAGGTTGTCACTGAGTGTGGAAGGCTTCCTTTGGCTCTTAAGGTGATTGGAGCATCTTTGCGAGATCAGACTGAGATGTTTTGGCTAAGTGTTAAAAACAGGTTGTCTCAAGGCCAAAGCATTGGGGAATCCCACGAAATCAATCTGATTGAGAGAATGGCAATTAGTATCAATTACCTACCAGAGAAAATCAAGGAATGCTTCTTAGACCTGTGTTCATTTCCTGAGGATAAAAAAATTCCTTTGGATGTTCTCATCAATATCTGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTTGTTGAGCTCTCCAACAAAAATCTTCTCACCTTAATGAAAGAGGCTCGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTGAGAGACCTTGCCCTTAATTTGAGCAACCGTGCTAGCATCAATGAACGCCGGCGATTAGTTATGCCAAAACGAGAAAATGGAATTCCTAAAGAGTGGTTGAGATACAAGCACAAGCAATTTGAGGCTCAGATTATTTCAATTCACACAGGTGAAATGAAAGATGTGGACTGGTATAATCTGGAATTTCCAAAGGCAGAAGTTTTGATCATTAATTTCACATCCTCTGAGTACTTCTTACCTCCCTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAACATTTCAGTTTTCAAGAACTTGTCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCAGAATTATCAGGCATTGTCTTGGAAAACTTGGGGAAATTATTTATTGTCCTATGCAAGATTAATAACAGTTTGGTTGAAAAAGAGGTAGACATAGCCCAAGTCTTCCCAAACCTCTCTGAGCTCACTCTTGATCATTGTGATGATCTAACCCAATTCCCCTCAAGCATTTGTGGAATGAAGTCACTTCAAAACTTGAGTCTCACCAACTGCCACAATTTGACTCAATTACCTCTTGAACTAGGGAAACTAAAATCTCTAGAGATTCTTCGTTTGTATGCTTGTCCTGACCTGAAAACACTTCCTAATAGCATATGTGACATGGTGAGATTGAAGTACATTGACATTTCTCAATGTGTCAATCTGACATGCTTCCCTGAGGAGACTGGTAGACTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGTTCCATGATCAGAAATGTACCAAACTCTGCATTGTCATTGCAGTCTCTGCGACTGGTAATTTGTGACGAAGAGGTATCTGGTATTTGGAAAGAGGTTGAGAAGGCCAAGCCTAATGTGCATATTCAAGTATCAGAGCAGTACTTTGACTTGGACTGGCTTAAAGAGTGA 2457 0.4644 MAFNDFFAGEIATELLKMLINISRKSLLCRASADQLITYIHDLLPTIEEIKYSGVELPAQRQSQLMRLSELLRSGVDLSHKVLASSRWNVYRNLHLAKKMDKLEKTVSKFLLGPMQAHIMADVHHARFEMAERFDRVDNSIHRLEQYFGNIKIGVGGGGWVEEAVRSVDEDVVDGSSAVGLGFGKIKVREMVVGREDLWVVGISGIGGSGKTTLAREVCKDHQVRCYFRERILFLTVSQSPNVEQLRTKIWGYIMGNERLDANYVVPQWMPQFECKSEAARTLIVLDDVWTLSVVEQLVCRIPGCKFLVVSRSKFQTVLSYEVELLSEEDALSLFCHHAFGQKSIPSAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIERMAISINYLPEKIKECFLDLCSFPEDKKIPLDVLINIWVEIHDIPETEAYAIVVELSNKNLLTLMKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRASINERRRLVMPKRENGIPKEWLRYKHKQFEAQIISIHTGEMKDVDWYNLEFPKAEVLIINFTSSEYFLPPFINRMPNLRALIIINYSATYACLHNISVFKNLSNLRSLWLEKVSTPELSGIVLENLGKLFIVLCKINNSLVEKEVDIAQVFPNLSELTLDHCDDLTQFPSSICGMKSLQNLSLTNCHNLTQLPLELGKLKSLEILRLYACPDLKTLPNSICDMVRLKYIDISQCVNLTCFPEETGRLVSLEKIDMRECSMIRNVPNSALSLQSLRLVICDEEVSGIWKEVEKAKPNVHIQVSEQYFDLDWLKE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02099 818 PRINTS Disease resistance protein signature 361 375 - -
Spst8g02099 818 PRINTS Disease resistance protein signature 200 215 - -
Spst8g02099 818 PRINTS Disease resistance protein signature 276 290 - -
Spst8g02099 818 PRINTS Disease resistance protein signature 678 694 - -
Spst8g02099 818 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 816 IPR039203 GO:0050832
Spst8g02099 818 Gene3D Ribonuclease Inhibitor 516 802 IPR032675 -
Spst8g02099 818 Gene3D - 185 321 IPR027417 -
Spst8g02099 818 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Spst8g02099 818 Pfam NB-ARC domain 197 404 IPR002182 GO:0043531
Spst8g02099 818 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Spst8g02099 818 Gene3D - 408 497 IPR036388 -
Spst8g02099 818 Gene3D - 325 407 IPR042197 -
Spst8g02099 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 426 IPR027417 -
Spst8g02099 818 SUPERFAMILY RNI-like 551 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02099 Spst-Chr8 29265867 29269211 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02099 197 786 WRKY Transcription Factor Family AT5G45050 23.852 1.98e-09 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02099 8 29265867 29269211 Spst8g02099 8 29265867 29269211 ECH