Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02092 ATGCACCTGAGCGAGAACGAAGGGATAGAGGGGAAGGCCTTCGTGGTGACGGGTGGACTCGGATTCGTAGGGTCTGCTCTCTGCTTGGAGCTCATTCGAAGGGGTGCCAGAGAGGTGCGAGCCTTTGACCTCCGCCGCTCCTCTCCTTCGTCCGCTGCTCTTCAGGATAAGGGCGTCCGCTGTATCCAAGGGGATGTTGGCCGCAAAGAAGACGTGGAAAGGGCCCTCCGTGGTGCCGACTGTGTATTCCACCTTGCGGCCTTTGGGATGTCAGGTAAAGAGATGCTCCAGTTCGGTCGTGTGGATGAAGTCAACATAAATGGGACATGCAATGTGCTCGACGCATGTCTCGACCTCGGCGTAAAAAGGCTTGTCTACTGTAGCACTTACAACGTTATCTTCGGTGGTCAACAGATCATCAACGGGAATGAGACATTGCCTTATTTCCCAATCGATCAACATGTTGATCCGTATGGCCGTAGTAAATCAATTGCTGAGCAGTTGGTTCTGAAGAACAATGGCCGCACTCTCAAGAACCACTCCGGAAATCTTTACACTTGTGCTGTTCGTCCAGCTGCAATCTATGGACCGGCCGAAGACAGGCACCTTCCTAGGATCGTAACCATGGCAAAGTTGGGTCTACTTTTGTTCAGAATTGGCGGCCAAACTGTAAAATCAGATTGGCTTTATGTGGATAACCTTGTCCTTAGTCTTATATTGGCCAGTATGGGACTTTTGGATGACACTCCTAGCAAGGGAAAACGCCCTGTAGCTGCTGGCCAGGCCTACTTTATATCTGATGGTTCACCGGTCAATTCTTTTGAATTCCTACAGCCTCTACTTAGGAGTTTGGATTATGAACTACCAAAGACTTCCCTACCTCTCGATCGGGCTCTTTTTCTTGGGAGGATTTGCTGGGCTGTTTATACCTTCCTATATCCATGGCTCAATCGGTGGTGGCTTCCACAGCCATTCATACTTCCGTCTGAAGTACTCAAGGTTGGGGTCACCCATTATTTCTCTTATCTTAAAGCTAAAGAGGAGATTGGTTATGTTCCCATGGTGACCCCGCGAGAGGGGATGGCTTTGACCATATCTTACTGGCAACAGAGGAAAAGGGCGACTCTGGATGGACCCACGATCTACGCGTGGTTGTTCTGTGTCATCGGAATGATCTCACTCTTTTGCGGTGCTTTCTTGCCTGACATAGGGATCGTGCCCCTTCTCAGAGCTATTTGTCTATTTGTGTTTCGATCAATATGGGTGGCAAGGGTGGTGTTTCTTCTGGCTACAACTGTACATATTGCTGAGGCCATTTATGCTTGGTGCCTGGCTCAAAGGGTAGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTCTTGGGATGTTTTCCTTGCGCTTCCTATTGAAAAGAGCAAGGAAATAA 1434 0.4909 MHLSENEGIEGKAFVVTGGLGFVGSALCLELIRRGAREVRAFDLRRSSPSSAALQDKGVRCIQGDVGRKEDVERALRGADCVFHLAAFGMSGKEMLQFGRVDEVNINGTCNVLDACLDLGVKRLVYCSTYNVIFGGQQIINGNETLPYFPIDQHVDPYGRSKSIAEQLVLKNNGRTLKNHSGNLYTCAVRPAAIYGPAEDRHLPRIVTMAKLGLLLFRIGGQTVKSDWLYVDNLVLSLILASMGLLDDTPSKGKRPVAAGQAYFISDGSPVNSFEFLQPLLRSLDYELPKTSLPLDRALFLGRICWAVYTFLYPWLNRWWLPQPFILPSEVLKVGVTHYFSYLKAKEEIGYVPMVTPREGMALTISYWQQRKRATLDGPTIYAWLFCVIGMISLFCGAFLPDIGIVPLLRAICLFVFRSIWVARVVFLLATTVHIAEAIYAWCLAQRVDPANARGWFWQTFALGMFSLRFLLKRARK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02092 477 FunFam Short-chain dehydrogenase/reductase family 42E member 1 3 374 - -
Spst8g02092 477 Coils Coil 476 477 - -
Spst8g02092 477 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 14 370 - -
Spst8g02092 477 Pfam Transmembrane protein 254 386 472 IPR028110 -
Spst8g02092 477 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 295 IPR002225 GO:0003854|GO:0006694|GO:0016616
Spst8g02092 477 Gene3D - 4 374 - -
Spst8g02092 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 373 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02092 Spst-Chr8 29090190 29092046 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02092 8 29090190 29092046 Spst8g02092 8 29090190 29092046 ECH