Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02045 ATGAGTGAAGACATGGAAATGAAAGATCAGGCAACGCCCTCACACTCGGTTTCTTCTGCTCTTCCATCTACATTGCACCATTTGAAGGAAATAGCTTCAATCATTGAAACCGGTTCGTACTCAAAAGAAGTCCGTCGAATTGCTCGTGCCATGCGCCTTACATTTGCATTGAGACGTAAACTTACGGCACCGCTTCTCTCATCTTTTCTTGAGTACGTTCTCGTGCCCGCTTCTGAACCTCACGCTAAGTTATCCTCTTATATTCCTAATCCCAAGGCCAAAGCTTGTTCCTCAGCAAGCATTGTTCGGCTGAAGAGTCTGAATAGAAGGACTTTTGATGTTATTGGATCGAGACTGTACTTTTATTACTCGTATAGCTATGAGCTTACAGGAGATCTTGCGGAAATTCGAGGCAACCTCCTTGCATTGCACCGGATTGCTACCCTGCACCATGATGAGCTGGGTAAGGAAACACTTCTTAATCTGTTACTTCGTAACTACCTACACTACAACCTATATGATCAGGCAGAGAAATTGAGGTCTAAGGCTCCACGTTTTGAGGCCCATTCAAATCAGCAGTACTGTCGTTATCTCTTCTACCTTGGCAAAATTCGGACAATTCAGCTGGAGTATACAGATGCAAAAGAGTCTCTCCTTCAGGCTGCCTGTAAAGCTCCCAGTGCTGCGCGAGGTTTTCGAATTCAATGTAACAAGTGGGCTCTGATAGTACGTTTATTATTGGGAGAAATACCTGAGAGGACTGTCTTCATGCAGAGAGGACTGGAGAAAGCTTTGAGGCCTTACTTTGAGCTTACTAACGCTGTCCGGATTGGTGACTTGGACTTGTTTAAGAATGTTGCAGAGAAGTTTGGTACAACTTTCAGTACAGATGGAACTCATAATTTGATTGATCGGCTGCGCCATAATGTCATCAGGACTGGTTTACGCAACATCAGTATATCATATTCATGCATATGGCTAGCTGATGTAGCTAAAAAGTTGAGGTTGAACTCTGCCGATCCTGTTGCAGATGCTGAGAGCATTGTAGCAAAGGCTATCCGTGATGGGGCCATTGATGCTTCATTAGATCATGCTGACAGGTGGATGATATCTAAGAAAATTGGAGATATTTACTCTACACATGAGCCTCAGTTGACATTTAATTCTTGGATTGTCTTTTGTCTTAACATGCACAAAGTGCTGAGAAGAGGAGAGAAAGACAACAAGAGCAAGAATTGGCTAAGCATATAG 1251 0.4333 MSEDMEMKDQATPSHSVSSALPSTLHHLKEIASIIETGSYSKEVRRIARAMRLTFALRRKLTAPLLSSFLEYVLVPASEPHAKLSSYIPNPKAKACSSASIVRLKSLNRRTFDVIGSRLYFYYSYSYELTGDLAEIRGNLLALHRIATLHHDELGKETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQYCRYLFYLGKIRTIQLEYTDAKESLLQAACKAPSAARGFRIQCNKWALIVRLLLGEIPERTVFMQRGLEKALRPYFELTNAVRIGDLDLFKNVAEKFGTTFSTDGTHNLIDRLRHNVIRTGLRNISISYSCIWLADVAKKLRLNSADPVADAESIVAKAIRDGAIDASLDHADRWMISKKIGDIYSTHEPQLTFNSWIVFCLNMHKVLRRGEKDNKSKNWLSI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02045 416 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 6 399 - -
Spst8g02045 416 Pfam PCI domain 267 373 IPR000717 -
Spst8g02045 416 SUPERFAMILY "Winged helix" DNA-binding domain 300 377 IPR036390 -
Spst8g02045 416 SMART PCI/PINT associated module 130 301 - -
Spst8g02045 416 Gene3D - 141 372 - -
Spst8g02045 416 ProSiteProfiles PCI domain profile. 195 376 IPR000717 -
Spst8g02045 416 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 301 394 IPR000717 -
Spst8g02045 416 FunFam 26S proteasome non-ATPase regulatory subunit 3 82 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02045 Spst-Chr8 28295706 28304130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02045 8 28295706 28304130 Spst8g02045 8 28295706 28304130 ECH
Spst8g02045 8 28295706 28304130 Spst9g00256 9 2359647 2362584 PCT