Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02030 ATGAGTCACTGCTCTGGTGCAGGCGTTGAATTCTTTATGTTCATTCTGCTTCAGACAATAATGGGGTCGGTTTGCTCAGCTGGTAAGGCTGAGAAAAACAAAAACAAAAACAAAGAGGTTGGAGGGAAAGCCTTGGGAAAGCTTAAGAAGTTAAAGAGTATTGCAGAGGGAAAAGTAGATTGTTATTCAAATCCAAAGACTAGTGATCATGGTAGAAAGAAAAAAAAAAGTGAATTCAAGACAACCAATCCTGGTGGAAAAGAAGGAAAACAGGGATCCCAGAAAGGTTCCATTTGGGGAAGAGCTGGTGAGAGGGCAGTGGAAGTTCTGGACACACTCGGAAGTAGTGTGCCAAAGTTAAGCAACAGTAATGCGTTTGACTCTGCCATGGCTCCTAGAGGAAATAAAATATCTATATTGGCATTTGAGGTAGCTAACACAATAAACAAAGGAGCAATCTTGTTTCAGTCACTGTCTGAAGAAAACATTCAGTTCCTTAAAAAAGAGATTTTACAATCAGAAGGGGTGCAACAATTAGTTTCAACAGATGCAAAGGAGTTAATAGGCCTTGTTGAAGTTGACAAAAGGGAAGAATTCAGTGCTTTTTCCCGGGAAGTAGCTAGATTTGGAAATATATGTAAGGATCCTCAGTGGCATAACCTAGAACGATTTTTCTCAAGATTACATATGGACATCTTGGACGCCAAGCAATCAAGGGGTGAGGCAGAAAAGAAAATGCAGGACTTGACAACTCTAGCTCACAATACTGCTGAATTATATCACGAGTTAACTTCATTAGAACGTTTTGAACAAGATTATCAGAACAAGATTAAGGAAATGGAATCCTTAAATCTTCCACTCAACGGGGACAGTCTCACAGCTTTTCAGAATGAAATAAAGCATCAGAGAAAGCTTGTGAGGAACTTAAAACGGAAATCTCTTTGGTCCAGAAGATTGGAAGAGATTGTTGAAAAGCTTGTGGATATAGTTACCCATATGGATCAAACAATTCTTGAGTTCCTTGGAAATCATGGTGCAACCTCTATAGAGTATTGTAAGGGTTCTGAAAGGCTTGGTGAAGCTGGTCTCGCACTGCACTATGCTAACATCATCAATCAGATAAACATGATTGCATCTCGGCCAACTGTACTTCCTCCAAATATGAGGGATACATTGTATCACGGATTGCCTAATAATATCAAGAGTGCACTTCCTTCTAGATTGCAAAATGTTGATGCCATGAAAGAGCTCTCTATCACTCAGATCAAAGCTGAAATGGATAAGACTCTGCATTGGCTTACTCCATTTGCCACAAATACGATCAAGGTAAATCAAGGTTTTGGATGGGTTGGCGAATGGGCAAATACAAGCACTGAGTTTTGTGAAAACACAGCCAAAGAAAACAAACTGATTAGGCTCCAGACACTTTACTATGCTGAGAAGCAGAAGATAGATTTTTATATCATTGAATTGTTGACAAGGCTTCACTGCTTGGTTACCTTTGTAAGATACAGACATAGTAATCCCATGAGACCAATGTCCGCTAAAACTTCTCCAAGCCGACTTGAGTTCCAAGCAAAGATGCTACAATTTATAACCTTAGACAGTATTAGCAAGTCATTGGGAACTCAACTTTCTCACGAGGACAAAAGATTGTTAGAGGAAGTAACTATGAGAAGAAGGAACCCAGGAGTCAGCAAAAGTGAAGATCTTGCAGTGACCAAGAAAAGAAGAGCCAAAGTTTATCATCACTGCAGTAGTGTAGGGAGTTCACCTGTTACAACAAAAGCTTTGGAGCACCAAAGATCTAATGTTTTAGATATTATAGATGGGTTATAA 1839 0.3942 MSHCSGAGVEFFMFILLQTIMGSVCSAGKAEKNKNKNKEVGGKALGKLKKLKSIAEGKVDCYSNPKTSDHGRKKKKSEFKTTNPGGKEGKQGSQKGSIWGRAGERAVEVLDTLGSSVPKLSNSNAFDSAMAPRGNKISILAFEVANTINKGAILFQSLSEENIQFLKKEILQSEGVQQLVSTDAKELIGLVEVDKREEFSAFSREVARFGNICKDPQWHNLERFFSRLHMDILDAKQSRGEAEKKMQDLTTLAHNTAELYHELTSLERFEQDYQNKIKEMESLNLPLNGDSLTAFQNEIKHQRKLVRNLKRKSLWSRRLEEIVEKLVDIVTHMDQTILEFLGNHGATSIEYCKGSERLGEAGLALHYANIINQINMIASRPTVLPPNMRDTLYHGLPNNIKSALPSRLQNVDAMKELSITQIKAEMDKTLHWLTPFATNTIKVNQGFGWVGEWANTSTEFCENTAKENKLIRLQTLYYAEKQKIDFYIIELLTRLHCLVTFVRYRHSNPMRPMSAKTSPSRLEFQAKMLQFITLDSISKSLGTQLSHEDKRLLEEVTMRRRNPGVSKSEDLAVTKKRRAKVYHHCSSVGSSPVTTKALEHQRSNVLDIIDGL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02030 612 Coils Coil 292 312 - -
Spst8g02030 612 PANTHER OS01G0873900 PROTEIN 21 611 IPR045021 GO:0045927
Spst8g02030 612 Pfam Domain of unknown function (DUF3475) 139 195 IPR021864 GO:0045927
Spst8g02030 612 MobiDBLite consensus disorder prediction 63 83 - -
Spst8g02030 612 MobiDBLite consensus disorder prediction 62 98 - -
Spst8g02030 612 Pfam Protein of unknown function (DUF668) 357 442 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02030 Spst-Chr8 27995611 28001176 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02030 8 27995611 28001176 Spst9g00279 9 2660347 2664678 PCT