Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02024 ATGAAAGATGGCCTCACGGCCCCTTCTCGGGTGCAAGAATTGGTTTCTGTAATGAAGAAGGAGCAAGATTGTGTTGTTAAGAATGCTGATGCGACAAGGCAGTGGGCTGCTGTCGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTTGATCTTTTTGTTCAATTAGATGGACTTTGGTTCATCAACAGATGGTTAAAGGATGCCCAAAATTTGGGTGCTGATAACATGAATGATGGCTTCATTGAAGAGTCAATTACTTCAATGTTACGAGCAGTTGAAAAACTATGTCTAGACAGTGAAAAGTCAACTTCATCAGGAATTTCAGTAACTGTCATTAACCTTCTTGGCCATCACAGCTCCAAAGTGCAGGATAGAGCAAGAGCATTATTTGACCACTGGAAGGAAGGTGGGCATGGAGATGCTGAATCTCGAGATAATGCAGATCTTGATAGACTTGACAATGAGAGTGATAAGATTGCAAGGGGGGAAGGCCAGCCATCTTGTGGGAATGATGAAGCTGGTAGTGACAATCATCATACATCTCAACTTGCTGGGGGCGAGAAGTCTCTATTGGGAGACTCAGATAGTCAACTACAAGAGAAAGTTTCTGGTTTTCAGGTACAGAGTGTTGACAATGCACTCCAATCCTCTGTAAGTTTGGATTGTGAAGATATCAAAGAGAAATCAAGCCATGTTGATAGTGCTTCGGCTTCTGTTCAAGAATCTACCTTATGTGAAGGTGAGTCCACATTGGCTGAGACCTGTAACTTACCTGTTACTAGACAAGGCAGTTTCAAAGGACAAGATGATTTACAGTTAAATGACTTTTCCAAAAAGGAAAAGCAAGACCAAGATGTTAATGATCCTCCTGAATTAAGATCATCAGATATCTCTTCTACATCTGCAAAGCCAGATCCTGAACCTGATTCTACTGGTGATAGTGAAGCAAAAGGATTGGAATCTGTTAAAAAAGAACCTGCTTCAGAACATAATGTTGAAAGCAATGAAAATGTCGTTTGTCCTAAAATAATTGTTTCTGGTAGCATGCGAACACCTGCATCTGATGGAATGAGTGAGGGTGATAATGTCAGAGCTACAAATTCTAGTAATCCACAACTTTCCAAAGCATCAGAAAACGATGATGACAGTTGTTCAAAAATGTTTCCCGAGTTATCTGTCACTGGAAATAACTTGGAAAAGCCTGAGATGTCTGTCCTCAAATCCGATTATGTTGGAGCAGTAATTGAAAACAAAGACCAAGAGTCTGATCAAGATGATCATACGTCAAATGGCTCTGGTTCTTTTAATCAGGGAAAAGGTCCAAGAAGCCCTAACATTATTGACAAGGGTTCTGACATGGAAATTGAGTATGGTATTGTTGATGCTTTAGAAGTTGCTCGACTAGTTGCCCAAGAAGTTGAGAGAGAATGTGCCAGTCCTGTAAAGGAAGGGAATGGCCATGGTTCTAATTGTACCACAAATGGTTCTGATTCTTTTAAATGGAGAAATGGTCCCAAAAGCTCTAATGTTATTGGCAAGAGTTCTGAAATTGAACTTGATTATGGTATGGTTGATGCTTTAGAAGTTGCCCGACAAGTTGCTCAGGAGGTTGAGAGAGAAGTTTGCAGCTCTTCAGAGAAAATCTCAGAAGGTGGAATTAGGCAGGCAGGCAGCCTTGACTCTGTAGGAAGAAAGGATGAGGTCACTCATGTCCTGCCTGAGGAAGTATCATCCAGGCAAAGCAACTCTGCTGAAGTGTGTTCTGAAGAGGTGGGACGTCAGAGTGTTTCAGATAATGTCGAGGCTGGGCTAGATGACTTGGACTCCTCGCAAGTTACTGAAGCAGCTCGAGACCCAGGAGGTAATTCAGATAAAAGTCTCTGTACTTTTGATCTCAATGAAGAAGTTGGTTCTGATGATATGGATGTATCTGTAAATGCTATGTCTACTATGCCAATACCAGTTGTCTCTGCTTCAAAACCTGCACAATCTTCTGGGTTACCAATGGCCCCTCTGCAGTTTGAGGGGACCCTCGGATGGAAAGGGTCAGCTGCCACCAGTGCCTTTCGCCCTGCATCACCTCGCAAAAATTCTGACAGTGAGAAGAACGTTGCTGTTGGTAGGAACTGTGAGATTTCCAAGCAGAGGAATTGTTGCCTTGATTTTGATCTGAATGTGGCGGAAGGTGAAGAAGGATTGGTAAAACAACTTGGTGCATCTTCAGGCCTTCCTTCTGGCCAATCATCAGTGGAACTTAGTCCTAAAAGATCAAACAGGTTCGAATTGGATTTAAACAGTACTGGGGATGATGGTGATGGCCAACCTTCAGATCAGAGGATAGAGGGTCCACTCTTTTCTGGAAGAAATGGTTATTGGAGCCCTTCACCTGCGTCATCGTCATCATCAATGCAACCTTCAGTACGGAACATTGATTTGAATGACAGACCGTACTTTCAAACGGATTTAGTGGACCAAGGGCATAGTAAGTCATCTTCGATTATTGAAGCATATAAACGGTCTAAATTGGATGCTCCTGTTATCTCTATTTTAGGTGCCAAGGTGGAAGTTAGTAGAAGAGAATATGTTCCTCAAAGTTTGTCGTTGCCAAATGGCAAGGCTATTGAGCCAGCAATGGATCTTCCATTGTCAGGAGCAGGTGGCATTTTAGGAATGGCTCCCCCACTTTCCTACAATCATTCAAATGCTTTTGGGTATAATGGACTCACATCGGTGCCTGCTTTGTCTTTTTCATCAGCCATGTATGGACCATCTGGTGGCCCACTTCCATACATGGTAGACTCGAGAGGTACTCCGGTTGTGCCTCAGGTTGGGGGATCTTCCTCAACCGTCCTGTCATCTTATACTCAGTCTCCATTTATTGTAAGCATGACTGGCACGCAACTTGGTTTAAATGGGGTTGGATCTTCACATCCAAACTTTGATCTAAACTCCGGATTCACGATTGATGGCCCGAACAGAGACATGTTGACTGCAAGGCAATTTTTCTTTCCTGCTCAAGGCAGAGGTATTGAGGAGCATGTAAGGCCCCTTCCACAATCCTCTAGTTCTGGGGTTACTGTGAAAAGAAAGGAACCGGAGGGTGGCTGGGAAACCTATCCACGTAGCTACAAACATCAGCAACCTCCTTGGAAATAG 3162 0.4317 MKDGLTAPSRVQELVSVMKKEQDCVVKNADATRQWAAVASTIAATENKDCLDLFVQLDGLWFINRWLKDAQNLGADNMNDGFIEESITSMLRAVEKLCLDSEKSTSSGISVTVINLLGHHSSKVQDRARALFDHWKEGGHGDAESRDNADLDRLDNESDKIARGEGQPSCGNDEAGSDNHHTSQLAGGEKSLLGDSDSQLQEKVSGFQVQSVDNALQSSVSLDCEDIKEKSSHVDSASASVQESTLCEGESTLAETCNLPVTRQGSFKGQDDLQLNDFSKKEKQDQDVNDPPELRSSDISSTSAKPDPEPDSTGDSEAKGLESVKKEPASEHNVESNENVVCPKIIVSGSMRTPASDGMSEGDNVRATNSSNPQLSKASENDDDSCSKMFPELSVTGNNLEKPEMSVLKSDYVGAVIENKDQESDQDDHTSNGSGSFNQGKGPRSPNIIDKGSDMEIEYGIVDALEVARLVAQEVERECASPVKEGNGHGSNCTTNGSDSFKWRNGPKSSNVIGKSSEIELDYGMVDALEVARQVAQEVEREVCSSSEKISEGGIRQAGSLDSVGRKDEVTHVLPEEVSSRQSNSAEVCSEEVGRQSVSDNVEAGLDDLDSSQVTEAARDPGGNSDKSLCTFDLNEEVGSDDMDVSVNAMSTMPIPVVSASKPAQSSGLPMAPLQFEGTLGWKGSAATSAFRPASPRKNSDSEKNVAVGRNCEISKQRNCCLDFDLNVAEGEEGLVKQLGASSGLPSGQSSVELSPKRSNRFELDLNSTGDDGDGQPSDQRIEGPLFSGRNGYWSPSPASSSSSMQPSVRNIDLNDRPYFQTDLVDQGHSKSSSIIEAYKRSKLDAPVISILGAKVEVSRREYVPQSLSLPNGKAIEPAMDLPLSGAGGILGMAPPLSYNHSNAFGYNGLTSVPALSFSSAMYGPSGGPLPYMVDSRGTPVVPQVGGSSSTVLSSYTQSPFIVSMTGTQLGLNGVGSSHPNFDLNSGFTIDGPNRDMLTARQFFFPAQGRGIEEHVRPLPQSSSSGVTVKRKEPEGGWETYPRSYKHQQPPWK 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02024 1053 MobiDBLite consensus disorder prediction 576 597 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 482 507 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 310 333 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 421 451 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 293 309 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 793 811 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 353 380 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 575 628 - -
Spst8g02024 1053 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 7 138 IPR035441 -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 687 706 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 280 402 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 172 186 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 429 443 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 159 199 - -
Spst8g02024 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 490 1053 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 1015 1053 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 740 811 - -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 692 706 - -
Spst8g02024 1053 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 49 146 IPR035441 -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 487 507 - -
Spst8g02024 1053 ProSiteProfiles TFIIS N-terminal domain profile. 61 142 IPR017923 -
Spst8g02024 1053 MobiDBLite consensus disorder prediction 742 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02024 Spst-Chr8 27834617 27837778 Dispersed/Wgd