Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02020 ATGGCCTTTGCTGCAATTCTAGAGGGATCCTTCCATGCAAAACTAGATCGCACCAACGAGGAGCTGTTGCACCACCCCACAGTAGACATCAAGACTGTGTTATCACAGTTGATGGACAGGTTGTCAAATTATGCTGCCTCTAGTACTGAAGTATTGCCCGAATTTCTGCAAGTGGAAGCATTTACCAAATTAAGCACAGCAATAAGCAGGGTGATAGAAGCACAAGCCGACATGCCTATTGTGGGAGCAATAGCTTTGCATGTTTCTCTTCTTACATTTACTCTCCGTGTTCATCCGGATCGATTTGATTATGTGGATCAAGTACTGGGATCATGTGTTAAGAAGCTTTCTGGAAAACCAAAGCTTGATGACAATAGAGCAACAAAGCAAGTCGTTGCACTTTTAAGTGCTCCACTTGATAAATACAATGATATTGTGACCGCCTTGACACTTTCTAATTATCCTCGTGTAATGGATCATCTTGATCATGAAACAAATAAGGTCATGGCCATGGTTATTATCCAAAGTATTATGAAGAATAACACGTGCATCTCTACTGCAGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTTATAATGGACGTGGATGGAACAACTGTGGATGAGGTTGATGAAGAAGATTTCAATGAGGAGCAAAATTCTGTTGCTCGTCTCGTCCACATGCTTCATAATGATGAACCAGAGGAAATGTTTAAGATAATATGTACCGTAAAGAAGCATATTATGAGTGGAGGACCAAGGCGCTTACCTTTTACAGTTCCTTCCCTGATATTTTCTGCACTCAGGTTGATCAGGCAATTGCATGGGCAGGATGGAGATATTGTGGGAGAAGAAGTTCCTACAACACCAAAAAAAATATTCCAGCTTTTAAATGAGATAATTGAAGCTCTTTCTTCTGTGTCATTTCCTGAACTGGCGTTAAGACTGTATCTGCAATGTGCTGAGGCTGCTAATGACTGTGACCTTGAGCCTGTTGCTTATGAATTTTTCACTCAGGCATTTGTATTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAGGTAACCGCAATACATTTAATTATCGGGTCTCTTCAGAGAATGAACGTCTTTGGTGTTGAGAACAGGGATACATTAACACACAAGGCAACAGGGTATTCAGCCAAACTTTTGAAGAAACCTGATCAGTGTCGAGCAGTTTATGCATGTTCTCATCTCTTTTGGGTTGATGATCAAGATGGTATTAAAGATGGAGAAAGGGTATTGCTTTGCCTTAAGCGTGCTTTGAGGATTGCAAATGCTGCTCAACAAATGGCCAATGTAGCAAGGGGCAGCAGTGGTCCAGTAACATTATTTGTTGAAATACTGAACAAGTACATATATTATTTTGAGAAAGGAAACCCGCAGATCACTAGCGCTACTATCCAGGGGCTTATAGAATTGATCATGACTGAGATGCAGAGTGACTCTGCATCAGCTATTCCTGCCTCAGATGCCTTTTTTACCAGCACATTGAGGTATATCCAATTTCAAAAAGAGAAAGGCGGTATACTAGGTGAAAAATATGACCCTATCAAGGTCCAAACCCCTGCCTAA 1602 0.4064 MAFAAILEGSFHAKLDRTNEELLHHPTVDIKTVLSQLMDRLSNYAASSTEVLPEFLQVEAFTKLSTAISRVIEAQADMPIVGAIALHVSLLTFTLRVHPDRFDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSAPLDKYNDIVTALTLSNYPRVMDHLDHETNKVMAMVIIQSIMKNNTCISTADKVEVLFELIKGLIMDVDGTTVDEVDEEDFNEEQNSVARLVHMLHNDEPEEMFKIICTVKKHIMSGGPRRLPFTVPSLIFSALRLIRQLHGQDGDIVGEEVPTTPKKIFQLLNEIIEALSSVSFPELALRLYLQCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGSLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSATIQGLIELIMTEMQSDSASAIPASDAFFTSTLRYIQFQKEKGGILGEKYDPIKVQTPA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02020 533 Gene3D - 205 514 IPR042491 -
Spst8g02020 533 PANTHER VACUOLAR SORTING PROTEIN 35 25 528 IPR005378 GO:0015031|GO:0030906|GO:0042147
Spst8g02020 533 FunFam Vacuolar protein sorting-associated protein 35 205 514 - -
Spst8g02020 533 Pfam Vacuolar protein sorting-associated protein 35 25 486 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02020 Spst-Chr8 27768099 27777210 Dispersed