Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02013 ATGATCCGGTTCATTCTGTTGCAGAACAGACAGGGCAAGACTCGTCTTGCCAAATACTACGTTCCTCTCGAAGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCATCGCCTCGTTGTCAACAGAGACCCTAAGTACACTAATTTCGTCGAGTTTCGTACGCACAAGATAATATACAGGCGATATGCGGGCTTGTTTTTCTCACTCTGTGTTGACATCACTGATAATGAATTGGCATACTTAGAGTGCATTCATTTGTTTGTTGAAATACTGGATCACTTCTTCAGCAATGTGTGTGAGCTCGATTTGGTTTTTAACTTCCATAAGGTCTATCTTATACTTGATGAATTCATTCTAGCGGGTGAACTGCAAGAAACAAGCAAGAAGGCTATCATTGAGAGAATGGGGGAATTGGAAAAACTGGAGTGA 429 0.4196 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKIIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKAIIERMGELEKLE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02013 142 PIRSF AP_complex_sigma 1 142 IPR016635 GO:0015031
Spst8g02013 142 Gene3D - 1 142 - -
Spst8g02013 142 CDD AP2_sigma 1 141 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Spst8g02013 142 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 140 IPR016635 GO:0015031
Spst8g02013 142 FunFam AP complex subunit sigma 1 142 - -
Spst8g02013 142 Pfam Clathrin adaptor complex small chain 1 141 IPR022775 -
Spst8g02013 142 SUPERFAMILY SNARE-like 1 136 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02013 Spst-Chr8 27693464 27695008 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02013 8 27693464 27695008 Spst8g02013 8 27693464 27695008 ECH