Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02012 ATGATGTCTGTTACTGTCGCTGCCCCCACTTCCTCCGCTGCGGGAGCCTATCTTTCACGATCGTCACGGCGGCGATTCACGGTGGCTCTTCGATCTGATGTGTCAGTCACCCCAACTAGAATATTGACGAACCTGAAGCATGAGTGTGCCACTCCTCTGCCCCTTCTTCAGCAAGTGGCCAAAGCCATGTCTGATGACATGCGAGCTGGGCTTGGGCTTGGGCCTGGGTCTGAGCTCGGCCTTCCCATGATACCCACCTATGTTGAAAATCTTCCCACTGGGAATGAGAAAGGGTTGTTCTATGCCTTGGATCTTGGTGGAACAAACTTCCGCGTGCTGAGGGTGCAGTTGGGTGGGAAAGATGAGCGTGTTATCGCCACTGAGTTCGATCAAGTTTCCATACCTCAGGACCTCATGTTTGCGACATCTCAGGAATTGTTTGATTTCATTGCATCGGGGCTTGCAAAATTTGCGTCGAAGGAGGATGGTAGATTTCATATCTCAAAGGGAAGAAAGAGAGAGATTGGATTCACGTTTTCATTTCCTGTGAAGCAGACATCTATTGATTCTGGCATACTAATCAAGTGGACAAAGGGTTTTGCAGTCTCTGGAACAGCAGGAAGAGATGTGGTTGCTTGTCTGAACGAGGCAATGGAAAGACAAAGAATAGATATGCGAGTTTCTGCTCTGGTGAATGATACCGTGGGAACATTAGCGGGAGCAGAATACTGGGACAATGATGTTGTGGCTGCTGTCATTTTGGGTACTGGAACCAATGCTTGCTATGTTGAGCAGATCAGTGCCATTCCTAAGTTACAGGGCTATGCCTCTTCTTCTGGCAAAATGATCATTAGCACTGAGTGGGGAGCTTTCTCAAATAGTCTTCCATTAACCGAGTTTGATAGGGAAATGGATGCTGCTAGCATCAATCCGGGTGAGCAGATCTTTGAAAAGACAATCTCAGGAATGTACCTAGGTGAAATCGTTAGACGAGTTCTACTGAAAATGACTGAAGAGGGTGGTTTGTTTGGCAAATCTGTTCCACAAGAACTGTCTACACCTTTCATACTCGGGACCCCAGATCTATGTACCATGCAGCAAGACTGTTCTGGCGATTTACATGCAGTTGGGTCCCTCCTTTACGATATAGCAGGGGTTGAATCCAATTTAAGTGAAAGAAAAACAGTTTTAGAGGTTTGTGAGACTATTGTAAAGAGAGGTGGGAGCTTAGCTGGTGCAGGAATTGTGGGGATTTTAGAAAAAATGGAAGAGGATCAGAGAGGTCTCATCTTTGGAAATGGTAACAGAAGTGTTGTTGCCATAGATGGGGGCTTGTACGAAAATTATCCTCAATACAGGGCTTATTTGCAAAGTTCAGTCAAAGAGCTGCTAGGGATTGAAAAGTCAAAGAATGTGGTGATAGAGCATACAAAAGATGGATCTGGCATAGGAGCTTCTCTTTTGGCTGCTTCAAACTCCATCTACAAACAAAACTTATAG 1500 0.4573 MMSVTVAAPTSSAAGAYLSRSSRRRFTVALRSDVSVTPTRILTNLKHECATPLPLLQQVAKAMSDDMRAGLGLGPGSELGLPMIPTYVENLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFDQVSIPQDLMFATSQELFDFIASGLAKFASKEDGRFHISKGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTAGRDVVACLNEAMERQRIDMRVSALVNDTVGTLAGAEYWDNDVVAAVILGTGTNACYVEQISAIPKLQGYASSSGKMIISTEWGAFSNSLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLKMTEEGGLFGKSVPQELSTPFILGTPDLCTMQQDCSGDLHAVGSLLYDIAGVESNLSERKTVLEVCETIVKRGGSLAGAGIVGILEKMEEDQRGLIFGNGNRSVVAIDGGLYENYPQYRAYLQSSVKELLGIEKSKNVVIEHTKDGSGIGASLLAASNSIYKQNL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02012 499 Pfam Hexokinase 250 490 IPR022673 GO:0005524|GO:0005975|GO:0016773
Spst8g02012 499 SUPERFAMILY Actin-like ATPase domain 247 492 IPR043129 -
Spst8g02012 499 CDD NBD_sugar-kinase_HSP70_actin 102 264 - -
Spst8g02012 499 PANTHER HEXOKINASE 32 493 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Spst8g02012 499 PRINTS Hexokinase family signature 175 200 - -
Spst8g02012 499 PRINTS Hexokinase family signature 101 117 - -
Spst8g02012 499 PRINTS Hexokinase family signature 475 491 - -
Spst8g02012 499 PRINTS Hexokinase family signature 227 243 - -
Spst8g02012 499 PRINTS Hexokinase family signature 314 336 - -
Spst8g02012 499 PRINTS Hexokinase family signature 250 264 - -
Spst8g02012 499 PRINTS Hexokinase family signature 396 418 - -
Spst8g02012 499 Gene3D - 86 489 - -
Spst8g02012 499 ProSiteProfiles Hexokinase domain profile. 36 490 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Spst8g02012 499 ProSitePatterns Hexokinase domain signature. 175 200 IPR019807 GO:0004396|GO:0005524|GO:0006096
Spst8g02012 499 FunFam Phosphotransferase 86 254 - -
Spst8g02012 499 Pfam Hexokinase 43 243 IPR022672 GO:0005524|GO:0005975|GO:0016773
Spst8g02012 499 Gene3D - 62 478 - -
Spst8g02012 499 SUPERFAMILY Actin-like ATPase domain 33 245 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02012 Spst-Chr8 27689098 27692309 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02012 8 27689098 27692309 Spst8g02012 8 27689098 27692309 ECH