Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02011 ATGGCTCTCCTAACCTCCTTGCCTGAACACTCCACCACCCCTAAACGCCACAAAAGAAAACCACCACCACAACAACAACAACAACACCAGAAACAGAACCAGAAGCAGAAACAGAAACCACCCTCTTCATGGGACCAAATCAAGAACCTCTTAACCTGCAAACAGATGGAAGGTTCGAGGGTTCACGACCCTTCAAAAGGGTACTCGAAGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTGGCTTACTCACTAGGAAACCGGTAACCGCTTCTACACGCTCCACAACGACAAAATCAAACGCTGGACCAACCTACACGTCCTCATCTTCCAGGGGAATGCAATTCAGAAAGCTATCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAATTGCAAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAAGTCTTCCCTAAAATGGAATCTTTGGAGCTTCATCAAGCTGTTCGTCATGCTGTTTCGGAGCTGGGTCCGGAGGATTCGGGTAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCGATATGCAAGATCGAAAGGATACTAAAAGTGCACAATACCCAACGCACCATCCAACGGTTTGAGGAGTGCAGGGACACGGTAAAAAACCGTGCGACGAGTAGCAGCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAATGAACTCTTGCGGTTTCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGGTCCTCCTCGCTGTGCGCCTCCGTACCCGGCTGCGGTGTCTGCACAATCATCAGGCACGGTTTCCAAGGTTGCGGCGGAGGCGAAAACGCTAAGGCCAAGGGCGTGAGGACCACCGCCAGCAGCGGTAGGGCCCACGACTCCGTCGTGTGCGGCGACGGCACGCGGAGGGCAATGCTGGTGTGCCGCGTGATCGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCAGCCGTCGGAGGAAGAACACATGTCGGCTGCGTCCTATGATTCCGTAGCCGGGTACGCTGGAATCTACTCGAATCTGGAGGAGTTGGTTGTCTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTCGTTATTTATAAAGTGCCTTGTTAG 1233 0.5247 MALLTSLPEHSTTPKRHKRKPPPQQQQQHQKQNQKQKQKPPSSWDQIKNLLTCKQMEGSRVHDPSKGYSKIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTASTRSTTTKSNAGPTYTSSSSRGMQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRATSSSKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGCGGGENAKAKGVRTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTQPSEEEHMSAASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPC 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02011 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 42 406 - -
Spst8g02011 410 FunFam C2H2-like zinc finger protein 194 407 - -
Spst8g02011 410 Gene3D - 194 408 - -
Spst8g02011 410 MobiDBLite consensus disorder prediction 25 44 - -
Spst8g02011 410 ProSitePatterns Zinc finger C2H2 type domain signature. 170 193 IPR013087 -
Spst8g02011 410 MobiDBLite consensus disorder prediction 92 140 - -
Spst8g02011 410 SUPERFAMILY ADP-ribosylation 195 407 - -
Spst8g02011 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 198 IPR013087 -
Spst8g02011 410 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02011 Spst-Chr8 27660055 27662840 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst8g02011 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02011 8 27660055 27662840 Spst8g02011 8 27660055 27662840 ECH